Gene detail information of Glyur000048s00002257 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G39390.2 | 2.00E-149 | nucleotide sugar transporter-KT 1 |
| NR | XP_006579458.1 | 0 | PREDICTED: uncharacterized protein LOC100814890 isoform X1 [Glycine max] |
| Swissprot | tr|Q9SRE4|UGAL2_ARATH | 4.00E-98 | UDP-galactose transporter 2 |
| trEMBL | tr|I1K4T3|I1K4T3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G31940.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00048 | 361716 | 365689 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000048s00002257.1 | PF03151.11 | TPT | 158 | 300 | 7.70E-31 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.388 |
| SRR1783600 | control | 15.510 |
| SRR1783602 | moderate drought stress | 14.872 |
| SRR1811619 | moderate drought stress | 14.554 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 20.191 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 19.412 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 23.985 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 23.348 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.239 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.010 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 30.244 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 29.768 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.598 |
| SRR2868004 | Drought Stress (root) | 20.451 |
| SRR2967015 | Control (root) | 15.490 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.070 |
| SRR9715740 | Leaf | 10.067 |
| SRR9715741 | Leaf | 5.514 |
| SRR9715739 | Root | 5.473 |
| SRR9715742 | Root | 15.031 |
| SRR9715743 | Root | 12.232 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.394 |
| SRR8749028 | MeJA induced 9h | 3.962 |
| SRR8749029 | MeJA induced 9h | 3.133 |
| SRR8749030 | Uninduced | 1.113 |
| SRR8749031 | Uninduced | 0.426 |
| SRR8749032 | Uninduced | 0.391 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 32.396 |
| SRR8400027 | Control - Root | 46.374 |