Gene detail information of Glyur000048s00002242.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G64810.1 | 1.00E-23 | WRKY DNA-binding protein 51 |
| NR | XP_003630118.1 | 1.46E-72 | WRKY transcription factor [Medicago truncatula] |
| Swissprot | tr|Q93WU9|WRK51_ARATH | 6.00E-29 | Probable WRKY transcription factor 51 |
| trEMBL | tr|G7LBB4|G7LBB4_MEDTR | 5.00E-73 | WRKY family transcription factor {ECO:0000313|EMBL:AET04594.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00048 | 251948 | 254453 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | WRKY |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000048s00002242.1 | PF03106.10 | WRKY | 116 | 156 | 2.80E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.596 |
| SRR1783600 | control | 3.748 |
| SRR1783602 | moderate drought stress | 5.190 |
| SRR1811619 | moderate drought stress | 5.139 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.692 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.652 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.429 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.419 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 139.458 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 140.317 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 24.239 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 23.624 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.626 |
| SRR2868004 | Drought Stress (root) | 16.741 |
| SRR2967015 | Control (root) | 11.577 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 32.285 |
| SRR9715740 | Leaf | 29.206 |
| SRR9715741 | Leaf | 69.484 |
| SRR9715739 | Root | 2.409 |
| SRR9715742 | Root | 9.814 |
| SRR9715743 | Root | 6.741 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 25.207 |
| SRR8749028 | MeJA induced 9h | 35.958 |
| SRR8749029 | MeJA induced 9h | 40.215 |
| SRR8749030 | Uninduced | 52.406 |
| SRR8749031 | Uninduced | 59.179 |
| SRR8749032 | Uninduced | 27.066 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.665 |
| SRR8400027 | Control - Root | 5.536 |