Gene detail information of Glyur000048s00002240 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007163925.1 | 1.53E-16 | hypothetical protein PHAVU_L004900g, partial [Phaseolus vulgaris] |
| trEMBL | tr|V7D0L6|V7D0L6_PHAVU | 6.00E-17 | Uncharacterized protein {ECO:0000313|EMBL:ESW35919.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00048 | 242897 | 243517 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.295 |
| SRR1783600 | control | 10.725 |
| SRR1783602 | moderate drought stress | 10.676 |
| SRR1811619 | moderate drought stress | 11.703 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.423 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.724 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.270 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.085 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.343 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.668 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.033 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.692 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.482 |
| SRR2868004 | Drought Stress (root) | 22.597 |
| SRR2967015 | Control (root) | 12.744 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.189 |
| SRR9715740 | Leaf | 7.798 |
| SRR9715741 | Leaf | 8.098 |
| SRR9715739 | Root | 7.086 |
| SRR9715742 | Root | 14.274 |
| SRR9715743 | Root | 15.089 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 27.449 |
| SRR8749028 | MeJA induced 9h | 12.175 |
| SRR8749029 | MeJA induced 9h | 16.114 |
| SRR8749030 | Uninduced | 3.758 |
| SRR8749031 | Uninduced | 3.623 |
| SRR8749032 | Uninduced | 8.012 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 24.530 |
| SRR8400027 | Control - Root | 27.679 |