Gene detail information of Glyur000048s00002234 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G09960.1 | 1.00E-21 | |
| NR | NP_001237145.1 | 3.03E-48 | uncharacterized protein LOC100306075 [Glycine max] |
| trEMBL | tr|I1K4R2|I1K4R2_SOYBN | 6.00E-52 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G31770.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00048 | 219616 | 223634 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.806 |
| SRR1783600 | control | 4.740 |
| SRR1783602 | moderate drought stress | 5.855 |
| SRR1811619 | moderate drought stress | 5.845 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.364 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.279 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.063 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.765 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 45.635 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 47.044 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 42.425 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 42.242 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 48.083 |
| SRR2868004 | Drought Stress (root) | 72.426 |
| SRR2967015 | Control (root) | 36.594 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 107.259 |
| SRR9715740 | Leaf | 92.189 |
| SRR9715741 | Leaf | 118.646 |
| SRR9715739 | Root | 5.042 |
| SRR9715742 | Root | 22.414 |
| SRR9715743 | Root | 21.121 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 168.210 |
| SRR8749028 | MeJA induced 9h | 119.353 |
| SRR8749029 | MeJA induced 9h | 218.196 |
| SRR8749030 | Uninduced | 222.120 |
| SRR8749031 | Uninduced | 331.136 |
| SRR8749032 | Uninduced | 134.117 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 31.924 |
| SRR8400027 | Control - Root | 32.909 |