Gene detail information of Glyur000048s00002227 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G21970.1 | 1.00E-55 | stress enhanced protein 2 |
| NR | XP_003531379.1 | 3.89E-109 | PREDICTED: stress enhanced protein 2, chloroplastic-like [Glycine max] |
| Swissprot | tr|Q9SJ02|STEP2_ARATH | 8.00E-69 | Stress enhanced protein 2, chloroplastic (Precursor) |
| trEMBL | tr|I1KT92|I1KT92_SOYBN | 1.00E-109 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G14960.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00048 | 179552 | 184694 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 20.431 |
| SRR1783600 | control | 19.005 |
| SRR1783602 | moderate drought stress | 23.163 |
| SRR1811619 | moderate drought stress | 24.169 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 43.686 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 43.284 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 17.737 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 17.561 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 59.464 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 59.249 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.074 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 18.586 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.207 |
| SRR2868004 | Drought Stress (root) | 4.623 |
| SRR2967015 | Control (root) | 5.483 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 16.367 |
| SRR9715740 | Leaf | 28.418 |
| SRR9715741 | Leaf | 20.247 |
| SRR9715739 | Root | 16.760 |
| SRR9715742 | Root | 22.867 |
| SRR9715743 | Root | 19.439 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.739 |
| SRR8749028 | MeJA induced 9h | 3.795 |
| SRR8749029 | MeJA induced 9h | 4.208 |
| SRR8749030 | Uninduced | 5.205 |
| SRR8749031 | Uninduced | 4.972 |
| SRR8749032 | Uninduced | 9.934 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.694 |
| SRR8400027 | Control - Root | 12.114 |