Gene detail information of Glyur000048s00002226 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G21960.1 | 2.00E-125 | |
| NR | AFK43576.1 | 0 | unknown [Lotus japonicus] |
| COG | YP_723906.1 | 3.00E-21 | hypothetical protein Tery_4446 [Trichodesmium erythraeum IMS101] |
| trEMBL | tr|I3STI4|I3STI4_LOTJA | 0 | Uncharacterized protein {ECO:0000313|EMBL:AFK43576.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00048 | 179135 | 184670 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 18.620 |
| SRR1783600 | control | 18.927 |
| SRR1783602 | moderate drought stress | 30.349 |
| SRR1811619 | moderate drought stress | 30.254 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 39.787 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 40.347 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 16.786 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 16.700 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 51.211 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 55.252 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 40.531 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 40.222 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.347 |
| SRR2868004 | Drought Stress (root) | 8.351 |
| SRR2967015 | Control (root) | 10.024 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 39.925 |
| SRR9715740 | Leaf | 54.787 |
| SRR9715741 | Leaf | 37.598 |
| SRR9715739 | Root | 18.582 |
| SRR9715742 | Root | 25.339 |
| SRR9715743 | Root | 22.597 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.189 |
| SRR8749028 | MeJA induced 9h | 7.079 |
| SRR8749029 | MeJA induced 9h | 8.496 |
| SRR8749030 | Uninduced | 7.173 |
| SRR8749031 | Uninduced | 8.461 |
| SRR8749032 | Uninduced | 8.041 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.261 |
| SRR8400027 | Control - Root | 18.235 |