Gene detail information of Glyur000048s00002224 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G10010.1 | 7.00E-98 | |
| NR | XP_003531377.1 | 0 | PREDICTED: uncharacterized protein LOC100782686 [Glycine max] |
| trEMBL | tr|I1KT90|I1KT90_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G14940.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00048 | 163685 | 169669 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.295 |
| SRR1783600 | control | 8.225 |
| SRR1783602 | moderate drought stress | 9.750 |
| SRR1811619 | moderate drought stress | 9.756 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.136 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.929 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 34.152 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 33.394 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 21.059 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 20.910 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.068 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.062 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 38.073 |
| SRR2868004 | Drought Stress (root) | 26.882 |
| SRR2967015 | Control (root) | 24.058 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.922 |
| SRR9715740 | Leaf | 21.631 |
| SRR9715741 | Leaf | 25.401 |
| SRR9715739 | Root | 1.495 |
| SRR9715742 | Root | 11.912 |
| SRR9715743 | Root | 8.161 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 42.250 |
| SRR8749028 | MeJA induced 9h | 36.311 |
| SRR8749029 | MeJA induced 9h | 30.654 |
| SRR8749030 | Uninduced | 24.894 |
| SRR8749031 | Uninduced | 46.196 |
| SRR8749032 | Uninduced | 33.187 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 29.073 |
| SRR8400027 | Control - Root | 26.946 |