Gene detail

Gene detail information of Glyur000048s00002216

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G36220.1	7.00E-83	ferulic acid 5-hydroxylase 1
NR	XP_004504031.1	0	PREDICTED: cytochrome P450 750A1-like [Cicer arietinum]
COG	YP_003950164.1	3.00E-24	cytochrome p450 [Stigmatella aurantiaca DW4/3-1]
Swissprot	tr\|H2DH18\|C7A12_PANGI	5.00E-125	Cytochrome P450 CYP736A12
trEMBL	tr\|I1K4P2\|I1K4P2_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA05G31650.1}

Sequence

Transcript Sequence

>Glyur000048s00002216.1
GCCCAGCCCAGTAGCTTTTGGAACCAGAGATATATACTCTTTGCAAAAGCATTTTGAACTCTCCCAAATGGCTTGGATGATTTGGATACTAATTTTCCTAGTTTCTCTTGCATACCTGTGGCTAAGGGCAAGCAGGAAGAAAGCAAAGAGGTTACCTCCAGGACCAAAAGGGTTACCAATTTTGGGTAGCCTTCACAAGCTNGGTGCAAATCCTCACCGTGATTTGCACCAACTATCCCAAAAACATGGACCCATCATGTACCTGCGCTTAGGCTTTGTGCCCACCATAGTTGTTTCTTCACCCCAAGCTGCTGAAGTCTTCCTCAAGACCCANGACCTTGTCTTTGCAAGTAGACCCCCTCATGAGGGTTCAAAGCACATCTCTTGGGAGCAGAGGAACCTTAGCTTTGGTCCATATGGTTCCTATTGGCGCAACATGCGCAAGATGTGCACATTAGAATTGCTGAGCCAGAACAAAATCAACTCTTTCAGAAACATGAGGGAAGAAGAGCTTGACTTGTTGATAAGGGTAATAAGAGAGAAAGCACATGATGATGGAGGAGTTGCTGGTGGTGTTGATCTCAGTGCAAAGGTTGCAACANTCACTACTGACATGAGTTGTAGAATGGTTTTGGGGAAGAAGTATGTGGACAAGGACTTGGATGAGAAAGGGTTTAAAGCTGTGGTGCATGAGGGAATGCAGTTAGCAGCTACTCCTAATGTTGCTGATTANTTTCCTTACGTTGGGGCACTTGATTTACAAGGGCTAACGAGGCGCATGAAGGTTGTTGGTAAGATCTTTGATGACTTCTTTGAGAAAATTATTGATGAGCATATGCAACAATCATCAGATAACAACAGAGAGGACAAGGTCAAGGATTTCGTGGATGTCATGTTGGGCTTTGTTGGTACTCAAGAATCTGAATACCGTATTGAACGGCCCAATATCAAAGCTATCTTGCTGATAAGGCTTCTAATAGATGCAACACATGGTGTTGATGTTAGTGCAAAGGTTGCAACACTCACTACTGACATGAGTTGTAGAATGGTTTTGGGGAAGAAGTATGTGGACAAGGATTTGGATGAGAAAGGGTTTAAAGCTGTGGTATATGAGGGAATGCAGTTATTAGCTATTCCTAATGTTGCTGATTACTTTCCTTACATTGGGGCACTTGATTCACAAGGGCTTACTAGGCGCATGAAGGTTGTTGGTAAGATCTTTGACGACTTCTTTGAGAAAATTATTGATGAGCATATGCAACAATCATCAGATAAGAACAACAGAGAAGACAGCAAGGTCAAGGATTTCGTAGATGTCATGTTGGGCTTTGTTGGTACTAAAGAATCTGAATACCGTATTGAACGACCCAACATCAAAGCTATAATGCTGGATATGCTGGTGGGTTCAATGGATACTTCTGCCACAGCAATTGAGTGGGCAATTTCAGAGCTCCTAAAGCATCCAAGGGTGATGAAGAAAGTCCAAGAGGAGTTAGAAACCGTGGTGGGCATGAAGAGGAAAGTGGAGGAATCAGACTTGGACAAGTTGGAGTATTTGGACATGGTTCTAAAGGAAAGCTTTAGGATCCATCCAGTGGCACCACTACTAATCCCACACCAATCAGTTGAAGATTGCAAAGTTGGAGACTTTTTCATACCCAAGAAATCAAGGGTCATAATAAATGCATGGGCAATTATGAGAGACCCAAGTGCTTGGAGTGAGCCAGAGAGGTTCTGGCCTGAGAGATTTGAAGGAAGCAACATAGATGTGAGAGGGCGTGATTTTCAGCTGATACCATTTGGTTCTGGTAGAAGGGGGTGTCCTGGGTTGCAATTGGGTCTCACTACGGTGCGTTTGGTTGTGGCACAGCTTGTGCATTGCTTTGATTGGAAGCTGCCAAATGACATGTTACCTAGTGATTTGGACATGACAGAGGTGTTTGGTCTTACTATGCCTAGGGCCCATCATTTAATTGCTATTCCCACCTATCGTCTTCACTGTGAAACCGACTAGGTGAAAAAAAGGACAATGAAATTAACATTGTAGTTTTTGTTTGATATATTAGGTCTAATTTGAATATGACCTGCAAGAAGAAATAAATTGTCATCTTCCTTCCATCTCATCATTAAGACTTATATATATTCTATCGATAAAAAAAAGATTGTGTTTTTTTAATGCTACAAGATCCAAATTCATGAAAGCACACAATAAATGTATTGGGTGTTTTTTTTTAACTTCTGGAAGCAAAAAATAACCATTTGCACCAGGGGCGGAT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00048	133119	138405	+

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP76C1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000048s00002216.1	PF00067.17	p450	30	296	7.20E-33
Glyur000048s00002216.1	PF00067.17	p450	306	630	2.80E-76

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	12.605
SRR1783600	control	12.845
SRR1783602	moderate drought stress	19.348
SRR1811619	moderate drought stress	19.086

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	11.688
DRR006520	Root Summer glycyrrhizin high producing strain	11.717
DRR006521	Root Winter glycyrrhizin high producing strain	32.869
DRR006522	Root Winter glycyrrhizin high producing strain	32.274
DRR006523	Root Summer glycyrrhizin low producing strain	6.885
DRR006524	Root Summer glycyrrhizin low producing strain	6.635
DRR006525	Leaf Summer glycyrrhizin high producing strain	34.856
DRR006526	Leaf Summer glycyrrhizin high producing strain	35.239

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.852
SRR2868004	Drought Stress (root)	0.702
SRR2967015	Control (root)	3.104

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	68.731
SRR9715740	Leaf	52.191
SRR9715741	Leaf	80.568
SRR9715739	Root	1.300
SRR9715742	Root	4.057
SRR9715743	Root	4.634

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.066
SRR8749028	MeJA induced 9h	1.544
SRR8749029	MeJA induced 9h	0.985
SRR8749030	Uninduced	1.389
SRR8749031	Uninduced	1.281
SRR8749032	Uninduced	0.694

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	4.505
SRR8400027	Control - Root	6.074