Gene detail information of Glyur000048s00002209 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00048 | 102262 | 103847 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.282 |
| SRR1783600 | control | 3.241 |
| SRR1783602 | moderate drought stress | 5.861 |
| SRR1811619 | moderate drought stress | 6.295 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 16.072 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.563 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 575.486 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 593.724 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.451 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.994 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.893 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.530 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.988 |
| SRR2868004 | Drought Stress (root) | 58.625 |
| SRR2967015 | Control (root) | 122.485 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 85.330 |
| SRR9715740 | Leaf | 32.126 |
| SRR9715741 | Leaf | 74.988 |
| SRR9715739 | Root | 11.327 |
| SRR9715742 | Root | 10.722 |
| SRR9715743 | Root | 9.458 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 335.774 |
| SRR8749028 | MeJA induced 9h | 332.151 |
| SRR8749029 | MeJA induced 9h | 906.821 |
| SRR8749030 | Uninduced | 289.238 |
| SRR8749031 | Uninduced | 537.830 |
| SRR8749032 | Uninduced | 1248.214 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 60.854 |
| SRR8400027 | Control - Root | 56.793 |