Gene detail information of Glyur000048s00002189 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G21460.1 | 2.00E-63 | Nodulin MtN3 family protein |
| NR | XP_003526670.1 | 1.45E-110 | PREDICTED: bidirectional sugar transporter SWEET1 isoform X1 [Glycine max] |
| Swissprot | tr|Q8L9J7|SWET1_ARATH | 5.00E-89 | Bidirectional sugar transporter SWEET1 |
| trEMBL | tr|I1KAI8|I1KAI8_SOYBN | 5.00E-111 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G12740.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00048 | 3254 | 7475 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000048s00002189.1 | PF03083.11 | MtN3_slv | 105 | 188 | 4.60E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.333 |
| SRR1783600 | control | 0.338 |
| SRR1783602 | moderate drought stress | 6.238 |
| SRR1811619 | moderate drought stress | 6.086 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.781 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.286 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.238 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.492 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.873 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.924 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.330 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.405 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.237 |
| SRR2868004 | Drought Stress (root) | 0.028 |
| SRR2967015 | Control (root) | 0.022 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.036 |
| SRR9715740 | Leaf | 0.068 |
| SRR9715741 | Leaf | 0.530 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 2.160 |
| SRR9715743 | Root | 1.573 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.077 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.471 |
| SRR8400027 | Control - Root | 0.752 |