Gene detail information of Glyur000047s00004022 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G59840.1 | 7.00E-26 | |
| NR | KEH27490.1 | 1.84E-47 | allyl alcohol dehydrogenase-like protein [Medicago truncatula] |
| trEMBL | tr|A0A072UNS2|A0A072UNS2_MEDTR | 7.00E-48 | Allyl alcohol dehydrogenase-like protein {ECO:0000313|EMBL:KEH27490.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00047 | 494508 | 494810 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 70.620 |
| SRR1783600 | control | 73.305 |
| SRR1783602 | moderate drought stress | 67.984 |
| SRR1811619 | moderate drought stress | 73.936 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 75.710 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 80.120 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 50.822 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 55.030 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 69.895 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 74.985 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 84.125 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 77.963 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 144.524 |
| SRR2868004 | Drought Stress (root) | 124.463 |
| SRR2967015 | Control (root) | 127.941 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 237.793 |
| SRR9715740 | Leaf | 293.342 |
| SRR9715741 | Leaf | 191.774 |
| SRR9715739 | Root | 170.885 |
| SRR9715742 | Root | 83.201 |
| SRR9715743 | Root | 103.915 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 121.923 |
| SRR8749028 | MeJA induced 9h | 61.065 |
| SRR8749029 | MeJA induced 9h | 98.400 |
| SRR8749030 | Uninduced | 42.384 |
| SRR8749031 | Uninduced | 24.643 |
| SRR8749032 | Uninduced | 78.456 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 154.017 |
| SRR8400027 | Control - Root | 138.985 |