Gene detail information of Glyur000047s00004014 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G47020.1 | 0 | |
| NR | XP_004511757.1 | 0 | PREDICTED: uncharacterized protein LOC101495726 [Cicer arietinum] |
| trEMBL | tr|V7CH42|V7CH42_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW28605.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00047 | 435508 | 448875 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 27.091 |
| SRR1783600 | control | 27.165 |
| SRR1783602 | moderate drought stress | 26.602 |
| SRR1811619 | moderate drought stress | 26.573 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 20.138 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.055 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.463 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.245 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 17.444 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 17.473 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.816 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.883 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 28.125 |
| SRR2868004 | Drought Stress (root) | 26.736 |
| SRR2967015 | Control (root) | 27.174 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.750 |
| SRR9715740 | Leaf | 7.433 |
| SRR9715741 | Leaf | 9.485 |
| SRR9715739 | Root | 9.483 |
| SRR9715742 | Root | 36.426 |
| SRR9715743 | Root | 32.672 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.047 |
| SRR8749028 | MeJA induced 9h | 16.111 |
| SRR8749029 | MeJA induced 9h | 6.334 |
| SRR8749030 | Uninduced | 4.038 |
| SRR8749031 | Uninduced | 1.501 |
| SRR8749032 | Uninduced | 2.476 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 49.738 |
| SRR8400027 | Control - Root | 52.732 |