Gene detail information of Glyur000047s00004003


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G10950.13.00E-44Zinc-binding ribosomal protein family protein
NRXP_007209764.11.69E-58hypothetical protein PRUPE_ppa013350mg [Prunus persica]
COGYP_004004387.13.00E-1750S ribosomal protein L37ae [Methanothermus fervidus DSM 2088]
Swissprottr|Q9ZRS8|RL37A_PSEMZ2.00E-5860S ribosomal protein L37a
trEMBLtr|M5WNW1|M5WNW1_PRUPE6.00E-59Uncharacterized protein {ECO:0000313|EMBL:EMJ10963.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold00047294193296143-


Gene family

Gene familysubfamily
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KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0006412  translation


cellular_component

GO:0005622  intracellular

GO:0005840  ribosome


molecular_function

GO:0003735  structural constituent of ribosome

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000047s00004003.1PF01780.14Ribosomal_L37ae2912.30E-38


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control14.796
SRR1783600control15.149
SRR1783602moderate drought stress10.595
SRR1811619moderate drought stress10.304

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain29.149
DRR006520Root Summer glycyrrhizin high producing strain27.998
DRR006521Root Winter glycyrrhizin high producing strain18.663
DRR006522Root Winter glycyrrhizin high producing strain17.856
DRR006523Root Summer glycyrrhizin low producing strain34.126
DRR006524Root Summer glycyrrhizin low producing strain34.552
DRR006525Leaf Summer glycyrrhizin high producing strain18.177
DRR006526Leaf Summer glycyrrhizin high producing strain18.227

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)92.080
SRR2868004Drought Stress (root)48.422
SRR2967015Control (root)38.864

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf11.976
SRR9715740Leaf10.926
SRR9715741Leaf4.696
SRR9715739Root14.280
SRR9715742Root8.831
SRR9715743Root8.137

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h103.795
SRR8749028MeJA induced 9h38.793
SRR8749029MeJA induced 9h76.045
SRR8749030Uninduced9.085
SRR8749031Uninduced5.074
SRR8749032Uninduced5.273

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root25.932
SRR8400027Control - Root19.870

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved