Gene detail information of Glyur000047s00003980 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G17540.1 | 1.00E-39 | |
| NR | XP_004511729.1 | 1.31E-148 | PREDICTED: uncharacterized protein LOC101514747 isoform X1 [Cicer arietinum] |
| trEMBL | tr|K7K4X7|K7K4X7_SOYBN | 2.00E-146 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G41420.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00047 | 181681 | 186065 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.067 |
| SRR1783600 | control | 4.161 |
| SRR1783602 | moderate drought stress | 2.750 |
| SRR1811619 | moderate drought stress | 2.828 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.516 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.751 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.446 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.809 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.499 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.298 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.673 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.010 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.389 |
| SRR2868004 | Drought Stress (root) | 8.927 |
| SRR2967015 | Control (root) | 6.359 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.508 |
| SRR9715740 | Leaf | 5.960 |
| SRR9715741 | Leaf | 5.224 |
| SRR9715739 | Root | 1.217 |
| SRR9715742 | Root | 3.178 |
| SRR9715743 | Root | 2.617 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.170 |
| SRR8749028 | MeJA induced 9h | 3.070 |
| SRR8749029 | MeJA induced 9h | 3.696 |
| SRR8749030 | Uninduced | 3.040 |
| SRR8749031 | Uninduced | 0.460 |
| SRR8749032 | Uninduced | 1.522 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.186 |
| SRR8400027 | Control - Root | 10.586 |