Gene detail information of Glyur000047s00003975 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KGN65882.1 | 6.60E-11 | hypothetical protein Csa_1G537325 [Cucumis sativus] |
| trEMBL | tr|A0A0A0LYF7|A0A0A0LYF7_CUCSA | 2.00E-11 | Uncharacterized protein {ECO:0000313|EMBL:KGN65882.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00047 | 158800 | 159657 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.770 |
| SRR1783600 | control | 0.589 |
| SRR1783602 | moderate drought stress | 0.912 |
| SRR1811619 | moderate drought stress | 0.625 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 48.472 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 46.413 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.139 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.136 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 32.678 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 33.221 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.305 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.987 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.277 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.243 |
| SRR9715743 | Root | 0.028 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 14.887 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.000 |
| SRR8400027 | Control - Root | 0.000 |