Gene detail information of Glyur000047s00003966 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G47220.1 | 2.00E-11 | ethylene responsive element binding factor 2 |
| NR | XP_003524070.1 | 2.92E-24 | PREDICTED: ethylene-responsive transcription factor 1A-like [Glycine max] |
| Swissprot | tr|O80338|EF101_ARATH | 5.00E-16 | Ethylene-responsive transcription factor 2 |
| trEMBL | tr|I1K0U3|I1K0U3_SOYBN | 1.00E-24 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G05180.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00047 | 112198 | 112428 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.240 |
| SRR1783600 | control | 5.857 |
| SRR1783602 | moderate drought stress | 6.377 |
| SRR1811619 | moderate drought stress | 6.199 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 78.244 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 85.352 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.105 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.712 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 53.736 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 66.013 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 70.954 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 40.863 |
| SRR2868004 | Drought Stress (root) | 123.798 |
| SRR2967015 | Control (root) | 160.598 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 378.371 |
| SRR9715740 | Leaf | 614.214 |
| SRR9715741 | Leaf | 633.335 |
| SRR9715739 | Root | 99.484 |
| SRR9715742 | Root | 143.887 |
| SRR9715743 | Root | 144.644 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 39.704 |
| SRR8749028 | MeJA induced 9h | 27.067 |
| SRR8749029 | MeJA induced 9h | 28.441 |
| SRR8749030 | Uninduced | 55.836 |
| SRR8749031 | Uninduced | 191.214 |
| SRR8749032 | Uninduced | 123.784 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 36.482 |
| SRR8400027 | Control - Root | 64.382 |