Gene detail information of Glyur000047s00003965 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G61600.1 | 2.00E-05 | ethylene response factor 104 |
| NR | KHN28458.1 | 9.86E-27 | Ethylene-responsive transcription factor 6 [Glycine soja] |
| Swissprot | tr|Q40478|ERF5_TOBAC | 1.00E-08 | Ethylene-responsive transcription factor 5 |
| trEMBL | tr|C6TEG4|C6TEG4_SOYBN | 1.00E-18 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU20216.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00047 | 98840 | 99676 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 40.216 |
| SRR1783600 | control | 39.859 |
| SRR1783602 | moderate drought stress | 46.383 |
| SRR1811619 | moderate drought stress | 46.275 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 545.841 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 590.116 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.475 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.522 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 224.135 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 246.636 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 200.778 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 213.631 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 176.184 |
| SRR2868004 | Drought Stress (root) | 384.482 |
| SRR2967015 | Control (root) | 585.410 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 251.152 |
| SRR9715740 | Leaf | 440.571 |
| SRR9715741 | Leaf | 479.195 |
| SRR9715739 | Root | 396.254 |
| SRR9715742 | Root | 259.872 |
| SRR9715743 | Root | 300.666 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 233.571 |
| SRR8749028 | MeJA induced 9h | 199.244 |
| SRR8749029 | MeJA induced 9h | 153.100 |
| SRR8749030 | Uninduced | 115.217 |
| SRR8749031 | Uninduced | 153.262 |
| SRR8749032 | Uninduced | 340.049 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 156.353 |
| SRR8400027 | Control - Root | 213.095 |