Gene detail information of Glyur000047s00003963 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G47310.1 | 8.00E-84 | PPPDE putative thiol peptidase family protein |
| NR | XP_004511719.1 | 9.63E-144 | PREDICTED: deSI-like protein At4g17486-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q93VG8|PPDEX_ARATH | 6.00E-106 | DeSI-like protein At4g17486 |
| trEMBL | tr|C6TEF8|C6TEF8_SOYBN | 2.00E-131 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G03880.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00047 | 87476 | 91065 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000047s00003963.1 | PF05903.9 | Peptidase_C97 | 23 | 157 | 8.50E-48 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.688 |
| SRR1783600 | control | 16.978 |
| SRR1783602 | moderate drought stress | 12.667 |
| SRR1811619 | moderate drought stress | 12.459 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 23.809 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 23.533 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.132 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.155 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.320 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.281 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.954 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.833 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.747 |
| SRR2868004 | Drought Stress (root) | 16.273 |
| SRR2967015 | Control (root) | 18.693 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.425 |
| SRR9715740 | Leaf | 14.156 |
| SRR9715741 | Leaf | 17.009 |
| SRR9715739 | Root | 8.477 |
| SRR9715742 | Root | 10.045 |
| SRR9715743 | Root | 11.191 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.103 |
| SRR8749028 | MeJA induced 9h | 5.107 |
| SRR8749029 | MeJA induced 9h | 4.565 |
| SRR8749030 | Uninduced | 2.160 |
| SRR8749031 | Uninduced | 1.785 |
| SRR8749032 | Uninduced | 2.214 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.783 |
| SRR8400027 | Control - Root | 21.008 |