Gene detail information of Glyur000046s00004862.3 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G32010.1 | 4.00E-134 | HSI2-like 1 |
| NR | XP_006594624.1 | 0 | PREDICTED: B3 domain-containing protein Os07g0563300-like [Glycine max] |
| Swissprot | tr|Q0D5G4|Y7633_ORYSJ | 0 | B3 domain-containing protein Os07g0563300 |
| trEMBL | tr|I1M2C3|I1M2C3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G31970.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00046 | 473640 | 483457 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | B3 |
| EAR motif-containing Proteins | B3 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000046s00004862.3 | PF02362.16 | B3 | 272 | 371 | 1.60E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 42.126 |
| SRR1783600 | control | 42.611 |
| SRR1783602 | moderate drought stress | 49.558 |
| SRR1811619 | moderate drought stress | 49.230 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 39.940 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 39.442 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 45.641 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 44.249 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 48.263 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 48.495 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.871 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.819 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 43.692 |
| SRR2868004 | Drought Stress (root) | 50.681 |
| SRR2967015 | Control (root) | 58.187 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 66.554 |
| SRR9715740 | Leaf | 44.882 |
| SRR9715741 | Leaf | 72.034 |
| SRR9715739 | Root | 18.727 |
| SRR9715742 | Root | 86.551 |
| SRR9715743 | Root | 76.348 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 59.095 |
| SRR8749028 | MeJA induced 9h | 62.518 |
| SRR8749029 | MeJA induced 9h | 43.010 |
| SRR8749030 | Uninduced | 48.804 |
| SRR8749031 | Uninduced | 21.989 |
| SRR8749032 | Uninduced | 23.592 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 49.776 |
| SRR8400027 | Control - Root | 51.830 |