Gene detail information of Glyur000046s00004848 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G47670.1 | 0 | Transmembrane amino acid transporter family protein |
| NR | XP_004485720.1 | 0 | PREDICTED: lysine histidine transporter-like 8-like [Cicer arietinum] |
| Swissprot | tr|Q9SX98|LHTL8_ARATH | 0 | Lysine histidine transporter-like 8 |
| trEMBL | tr|G7ILF8|G7ILF8_MEDTR | 0 | Transmembrane amino acid transporter family protein {ECO:0000313|EMBL:AES63718.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00046 | 392930 | 397143 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000046s00004848.1 | PF01490.13 | Aa_trans | 100 | 511 | 7.20E-58 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 19.981 |
| SRR1783600 | control | 20.284 |
| SRR1783602 | moderate drought stress | 13.288 |
| SRR1811619 | moderate drought stress | 13.280 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 20.955 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.947 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.140 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.137 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 18.162 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 18.088 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.084 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.009 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 30.292 |
| SRR2868004 | Drought Stress (root) | 19.112 |
| SRR2967015 | Control (root) | 22.676 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.582 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.924 |
| SRR9715739 | Root | 19.132 |
| SRR9715742 | Root | 11.547 |
| SRR9715743 | Root | 10.746 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.625 |
| SRR8749028 | MeJA induced 9h | 0.141 |
| SRR8749029 | MeJA induced 9h | 0.715 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.032 |
| SRR8749032 | Uninduced | 0.024 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 25.893 |
| SRR8400027 | Control - Root | 27.374 |