Gene detail information of Glyur000046s00004847 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN07308.1 | 2.81E-16 | hypothetical protein glysoja_027398 [Glycine soja] |
| trEMBL | tr|K7L2M4|K7L2M4_SOYBN | 1.00E-16 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G31071.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00046 | 390008 | 390241 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 41.563 |
| SRR1783600 | control | 43.118 |
| SRR1783602 | moderate drought stress | 52.895 |
| SRR1811619 | moderate drought stress | 48.922 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 28.318 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 28.706 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 28.167 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 30.554 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 34.438 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 31.945 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.260 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.118 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.876 |
| SRR2868004 | Drought Stress (root) | 61.139 |
| SRR2967015 | Control (root) | 51.782 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 19.160 |
| SRR9715740 | Leaf | 5.030 |
| SRR9715741 | Leaf | 10.952 |
| SRR9715739 | Root | 43.579 |
| SRR9715742 | Root | 65.631 |
| SRR9715743 | Root | 59.866 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 142.304 |
| SRR8749028 | MeJA induced 9h | 17.706 |
| SRR8749029 | MeJA induced 9h | 31.525 |
| SRR8749030 | Uninduced | 1.940 |
| SRR8749031 | Uninduced | 0.195 |
| SRR8749032 | Uninduced | 1.730 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 23.433 |
| SRR8400027 | Control - Root | 38.511 |