Gene detail information of Glyur000046s00004844 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G21620.1 | 2.00E-12 | glycine-rich protein |
| NR | AFK41634.1 | 1.00E-35 | unknown [Lotus japonicus] |
| trEMBL | tr|I3SMZ2|I3SMZ2_LOTJA | 4.00E-36 | Uncharacterized protein {ECO:0000313|EMBL:AFK41634.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00046 | 368677 | 369129 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.030 |
| SRR1783600 | control | 1.742 |
| SRR1783602 | moderate drought stress | 0.481 |
| SRR1811619 | moderate drought stress | 0.724 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.621 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.799 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.392 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.871 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.083 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.382 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.919 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.851 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 58.667 |
| SRR2868004 | Drought Stress (root) | 24.481 |
| SRR2967015 | Control (root) | 26.491 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 58.099 |
| SRR9715740 | Leaf | 63.913 |
| SRR9715741 | Leaf | 64.819 |
| SRR9715739 | Root | 1.194 |
| SRR9715742 | Root | 18.017 |
| SRR9715743 | Root | 14.373 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 283.692 |
| SRR8749028 | MeJA induced 9h | 102.772 |
| SRR8749029 | MeJA induced 9h | 236.750 |
| SRR8749030 | Uninduced | 26.808 |
| SRR8749031 | Uninduced | 5.142 |
| SRR8749032 | Uninduced | 46.364 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.014 |
| SRR8400027 | Control - Root | 10.859 |