Gene detail information of Glyur000046s00004834 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G61170.1 | 3.00E-13 | |
| NR | XP_004485736.1 | 7.79E-111 | PREDICTED: uncharacterized protein LOC101508789 [Cicer arietinum] |
| trEMBL | tr|G7INX9|G7INX9_MEDTR | 4.00E-107 | BEST plant protein match is: (TAIR:plant.1) protein, putative {ECO:0000313|EMBL:AES63741.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00046 | 308896 | 309735 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 23.064 |
| SRR1783600 | control | 23.480 |
| SRR1783602 | moderate drought stress | 6.464 |
| SRR1811619 | moderate drought stress | 6.251 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.119 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.102 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.220 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.514 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.603 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.660 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.655 |
| SRR2868004 | Drought Stress (root) | 3.144 |
| SRR2967015 | Control (root) | 3.999 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.154 |
| SRR9715740 | Leaf | 0.540 |
| SRR9715741 | Leaf | 0.544 |
| SRR9715739 | Root | 6.628 |
| SRR9715742 | Root | 6.657 |
| SRR9715743 | Root | 7.150 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.872 |
| SRR8749028 | MeJA induced 9h | 0.300 |
| SRR8749029 | MeJA induced 9h | 0.129 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.866 |
| SRR8400027 | Control - Root | 19.426 |