Gene detail information of Glyur000046s00004817 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G33470.2 | 4.00E-92 | glycolipid transfer protein 1 |
| NR | XP_003556375.1 | 2.51E-140 | PREDICTED: pleckstrin homology domain-containing family A member 8-like [Glycine max] |
| trEMBL | tr|I1NI74|I1NI74_SOYBN | 9.00E-141 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G34980.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00046 | 210138 | 214806 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000046s00004817.1 | PF08718.6 | GLTP | 22 | 165 | 3.30E-52 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 23.126 |
| SRR1783600 | control | 23.330 |
| SRR1783602 | moderate drought stress | 14.734 |
| SRR1811619 | moderate drought stress | 14.715 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 44.694 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 43.947 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 35.612 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 34.712 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 25.844 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 26.245 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.529 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.443 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 71.595 |
| SRR2868004 | Drought Stress (root) | 61.181 |
| SRR2967015 | Control (root) | 49.331 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 32.111 |
| SRR9715740 | Leaf | 31.969 |
| SRR9715741 | Leaf | 36.329 |
| SRR9715739 | Root | 23.824 |
| SRR9715742 | Root | 36.783 |
| SRR9715743 | Root | 37.095 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 41.959 |
| SRR8749028 | MeJA induced 9h | 17.922 |
| SRR8749029 | MeJA induced 9h | 29.057 |
| SRR8749030 | Uninduced | 22.835 |
| SRR8749031 | Uninduced | 17.899 |
| SRR8749032 | Uninduced | 21.053 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 81.660 |
| SRR8400027 | Control - Root | 81.102 |