Gene detail

Gene detail information of Glyur000046s00004815

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G14330.1	0	P-loop containing nucleoside triphosphate hydrolases superfamily protein
NR	KHN05085.1	0	Kinesin-like protein KIF11 [Glycine soja]
Swissprot	tr\|F4JGP4\|ATK5_ARATH	1.00E-33	Kinesin-5
trEMBL	tr\|I1NI73\|I1NI73_SOYBN	0	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}

Sequence

Transcript Sequence

>Glyur000046s00004815.1
GTCCAAAATAAAAAGTGTANTTCAAAAAATATAAATGAACATATTGACGTTAGAGACTGTAACGGCTACATTTTGGTTGAAATTTCAAAACCCTGGTTCCAGTGTTTACTCCCTTGTTTCTCTCTCTCTCTCTCTCCATCATCTTCTTCATTTCTAGCTTTTTCTCGCACAGTGTCGTTCGACCCGAAAGGTTCAATCTTTCTTCTCTTTTGCTTCTGGGGTTTTGCCACTCACACATTCAATGGCTCCCACACCTTCTTCGAAGCCAAATCATTCCACCCAGTTGAAGACTCCACAGTCCAAGCATCGCCTCAACTTCAGTGGCCTCAAAGCAGCAGCACCGCCACCAACACCTAATCCCAATTATGCTGCCAACAACAAGGAAGCCCCACCTGAACACCCAATTGAAGTAATTGCCAGAATCCGTGACTACCCAGATCGGAAAGACAAGCCTTTACCGGTTCTTCAGACCAGTTCCAACTCGAGGTCTATTCGGGTTCGAGCCGATTTCGGGTACCGGGACTTCACCCTTGATGGGGTGTCCGTGTCTGAGGAAGAGGACTTGGATGCCTTCTACAAGAAATTTGTGGAATCAAGGATCAATGGGGTTAAGCTTGGGGATAAATGCACCATCATGATGTATGGCCCAACTGGTTCTGGCAAGAGTCACACCATGTTTGGGTGTTCAAAGCAGGCAGGGATTGTGTATAGGTCCTTGAGGGACATTCTTGGTGATGGGGATGCAGATTCTGATGGGAATGGGGATGGGGATTCCAAAGGACAGCGTCTTGGGTTGGGGACTTTTGTTCAAGTCACTGTTTTGGAGATTTACAATGAGGAGATTTATGATCTCTTGTCAACCAATGGAGGAGGTGGTGGTGGAGGATTTGGATTCGGGTGGCCTAAGGGCAGTGCTTCAAAGGTGAAACTTGAAGTGATGGGGAAAAAGGCTAAGAATGCAACCTATATATCTGGAAACGAGCCAGGGAAGATCTCAAAAGAAATTCAGAAAGTGGAGAAGCGAAGGATTGTTAAAAGCACACTTTGTAATGACAGGAGTTCTAGAAGTCACTGTATGGTGATACTTGATGTCCCAACCGTGGGAGGGCGGCTAATGCTTGTAGACATGGCAGGATCAGAAAATATTGAACAAGCTGGTCAAACTGGATTTGAGGCAAAAATGCAGACTGCAAAAATTAACCAAGGAAACACCGCGCTGAAGAGAGTGGTCGAGTCCATTGCAAATGGTGATTCACATGTGCCTTTTAGGGACAGCAAACTTACCATGCTTCTGCAGGATTCCTTTGAAGATGATAAGTCAAAAATTCTGATGATACTGTGTGCAAGTCCCGATCCTAAGGAGATACATAAGACAATATCTACACTTGAATATGGAGCAAAAGCAAAATGTATAGTTCGTGGCCCTCATACCCCAGTTAAGGAAGAGGAATCTTCTTCTGCTGTCATTATGGGGTCAAGAATTGCTGCAATGGATGAATTTATCATGAAGCTACAAATGGAAACCAAGCAAAGAGAGAAAGAGCGAAATGAAGCACACAAAAAGCTCATGAAGAAAGAGGAAGAAGTTGCTGAGTTAAGAGCTAAACTGGAAAATACAGAAGGCAAAAGAACCCCTGCAAGTGAGGAGGAGATTAACCTCAAGGTAAATGAACGAACCTGGTTTCTGAGACAAGAGTTGGAAAAGAAGTTGGAAGAGTGTCAAAGAATAACAAACGAGTTTGTTGAATTGGAGAGGAAGAGAATGGAAGAAAGGATACTGCAACAGCAGGAAGAAGTTGAGATTCTGAGAAAGAGACTGGAAGAAATTGAGCTGCAGCTGTGTTGTTCAAGGCAGGGCTCTGCTGAGGAAAATGAATCAAAAGACATGGAGTCAAGTGGGTTTGCAAGAAGGCTAATGCGTATTTACAAAAGCGAGGAGGATCCGGGAATGGTGAAATCAATGGATTTGGACATGGATGATCAAGAACCCCCTCCTGCACGCGAAGTAAACATTATTGGTGGAGTTACGTGCAGGAGTGGCTACAATGTTTTGNAAGACCTTTCAAATCAACCTCATCCAAATACTTTGATGAATGGTGTACAAGAAGATGCCTATGCTTGTGCACCAGGCTTTGGTCAAAGAGCATGTCTAAGTACAGTGTACGAGGAAGAAGGAGAAGGAGAGCAGGATCATGAAGAAGATAAAGTGGAGGATGAGGAAGTGGAGAAAGAAGTCATTGAAGAAAAGAGGGTATGTACTATTGACAAACCGAGTGCTGCTGGCTCCTTGGCATCTTTGAACCCTCACAGCACAAGAAGTCCAAAGAGGGAGGATCATTGTTTTAAGGAAATTCCAGGGGCTGACAAGGAGAATGGCTCTTCTAGGCTACTGAGAATTCAGAATATATTCACTCTTTGTGGAAACCAAAGGGAACTCTCCCAGCACATTGGAACCCCAATACCTACAAAAAAGAGGTCTGATGAAACTTTTGATCTCAAGTTTTCTCCTGTGAAGACAATTGAGAAGGATTCCATTTTCAAAGTCTCCAACAAGGAGAACCTGGAACCACATAATGTTGTGGGAAATTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00046	202907	206052	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0007018 microtubule-based movement

cellular_component
GO:0005871 kinesin complex

molecular_function

GO:0003777 microtubule motor activity

GO:0005524 ATP binding

GO:0008017 microtubule binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000046s00004815.1	PF00225.18	Kinesin	76	391	9.10E-67

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	9.702
SRR1783600	control	9.770
SRR1783602	moderate drought stress	12.985
SRR1811619	moderate drought stress	12.877

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	11.137
DRR006520	Root Summer glycyrrhizin high producing strain	10.852
DRR006521	Root Winter glycyrrhizin high producing strain	1.555
DRR006522	Root Winter glycyrrhizin high producing strain	1.354
DRR006523	Root Summer glycyrrhizin low producing strain	7.397
DRR006524	Root Summer glycyrrhizin low producing strain	7.540
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.489
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.493

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	17.195
SRR2868004	Drought Stress (root)	6.813
SRR2967015	Control (root)	10.099

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	3.036
SRR9715740	Leaf	0.944
SRR9715741	Leaf	1.107
SRR9715739	Root	0.916
SRR9715742	Root	2.736
SRR9715743	Root	1.947

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	14.152
SRR8749028	MeJA induced 9h	9.605
SRR8749029	MeJA induced 9h	9.656
SRR8749030	Uninduced	0.157
SRR8749031	Uninduced	0.595
SRR8749032	Uninduced	1.433

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	10.647
SRR8400027	Control - Root	8.277