Gene detail information of Glyur000046s00004800 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G38870.1 | 7.00E-15 | Serine protease inhibitor, potato inhibitor I-type family protein |
| NR | XP_003590801.1 | 5.66E-35 | Inhibitor of trypsin and hageman factor [Medicago truncatula] |
| Swissprot | tr|P24076|BGIA_MOMCH | 2.00E-22 | Glu S.griseus protease inhibitor |
| trEMBL | tr|G7I4R6|G7I4R6_MEDTR | 2.00E-35 | Inhibitor of trypsin and hageman factor-like protein {ECO:0000313|EMBL:AES61052.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00046 | 113990 | 114579 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000046s00004800.1 | PF00280.13 | potato_inhibit | 7 | 69 | 1.70E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.144 |
| SRR1783600 | control | 0.148 |
| SRR1783602 | moderate drought stress | 0.306 |
| SRR1811619 | moderate drought stress | 0.306 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 42.530 |
| SRR2868004 | Drought Stress (root) | 174.890 |
| SRR2967015 | Control (root) | 69.440 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.956 |
| SRR9715740 | Leaf | 1.381 |
| SRR9715741 | Leaf | 1.410 |
| SRR9715739 | Root | 0.249 |
| SRR9715742 | Root | 0.490 |
| SRR9715743 | Root | 0.464 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.671 |
| SRR8749028 | MeJA induced 9h | 13.931 |
| SRR8749029 | MeJA induced 9h | 9.038 |
| SRR8749030 | Uninduced | 92.554 |
| SRR8749031 | Uninduced | 531.279 |
| SRR8749032 | Uninduced | 99.369 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 76.854 |
| SRR8400027 | Control - Root | 75.938 |