Gene detail information of Glyur000046s00004794 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G43630.1 | 2.00E-09 | zinc knuckle (CCHC-type) family protein |
| NR | XP_003536233.2 | 0 | PREDICTED: uncharacterized protein LOC100798639 isoform X1 [Glycine max] |
| trEMBL | tr|K7LK78|K7LK78_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G32891.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00046 | 76002 | 80812 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.224 |
| SRR1783600 | control | 0.210 |
| SRR1783602 | moderate drought stress | 0.328 |
| SRR1811619 | moderate drought stress | 0.344 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.171 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.195 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 17.614 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.331 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.898 |
| SRR2868004 | Drought Stress (root) | 4.118 |
| SRR2967015 | Control (root) | 3.482 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 31.451 |
| SRR9715740 | Leaf | 46.747 |
| SRR9715741 | Leaf | 40.655 |
| SRR9715739 | Root | 0.010 |
| SRR9715742 | Root | 0.079 |
| SRR9715743 | Root | 0.049 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.782 |
| SRR8749028 | MeJA induced 9h | 32.787 |
| SRR8749029 | MeJA induced 9h | 14.081 |
| SRR8749030 | Uninduced | 36.736 |
| SRR8749031 | Uninduced | 23.583 |
| SRR8749032 | Uninduced | 10.833 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.324 |
| SRR8400027 | Control - Root | 1.496 |