Gene detail information of Glyur000045s00010001 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G10270.1 | 1.00E-14 | Wound-responsive family protein |
| NR | XP_003543269.1 | 5.02E-50 | PREDICTED: uncharacterized protein LOC100306608 [Glycine max] |
| trEMBL | tr|C6T050|C6T050_SOYBN | 2.00E-50 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G35820.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00045 | 472227 | 472612 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000045s00010001.1 | PF12609.3 | DUF3774 | 10 | 85 | 4.50E-32 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.231 |
| SRR1783600 | control | 16.424 |
| SRR1783602 | moderate drought stress | 2.943 |
| SRR1811619 | moderate drought stress | 2.826 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 68.482 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 69.847 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1390.254 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1363.494 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 229.323 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 225.769 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 17.843 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 20.763 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.600 |
| SRR2868004 | Drought Stress (root) | 34.499 |
| SRR2967015 | Control (root) | 45.351 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 24.059 |
| SRR9715740 | Leaf | 43.242 |
| SRR9715741 | Leaf | 42.413 |
| SRR9715739 | Root | 47.734 |
| SRR9715742 | Root | 113.186 |
| SRR9715743 | Root | 89.826 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1843.867 |
| SRR8749028 | MeJA induced 9h | 1496.204 |
| SRR8749029 | MeJA induced 9h | 1695.350 |
| SRR8749030 | Uninduced | 593.233 |
| SRR8749031 | Uninduced | 255.513 |
| SRR8749032 | Uninduced | 655.641 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 102.001 |
| SRR8400027 | Control - Root | 192.192 |