Gene detail information of Glyur000045s00010000 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G10265.1 | 3.00E-22 | Wound-responsive family protein |
| NR | XP_003540436.1 | 8.90E-45 | PREDICTED: uncharacterized protein LOC100777261 [Glycine max] |
| trEMBL | tr|I1LUV3|I1LUV3_SOYBN | 3.00E-45 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G34680.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00045 | 470092 | 470370 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000045s00010000.1 | PF12609.3 | DUF3774 | 12 | 87 | 1.80E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.111 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.801 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 384.947 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 382.038 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.188 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.397 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.276 |
| SRR2967015 | Control (root) | 0.498 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.221 |
| SRR9715741 | Leaf | 0.384 |
| SRR9715739 | Root | 5.490 |
| SRR9715742 | Root | 6.317 |
| SRR9715743 | Root | 5.368 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 329.608 |
| SRR8749028 | MeJA induced 9h | 642.029 |
| SRR8749029 | MeJA induced 9h | 567.952 |
| SRR8749030 | Uninduced | 722.097 |
| SRR8749031 | Uninduced | 352.812 |
| SRR8749032 | Uninduced | 729.233 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.736 |
| SRR8400027 | Control - Root | 9.470 |