Gene detail information of Glyur000045s00009983 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G25610.1 | 1.00E-45 | BURP domain-containing protein |
| NR | AES66786.2 | 5.17E-152 | embryonic abundant-like protein [Medicago truncatula] |
| Swissprot | tr|P21747|EA92_VICFA | 7.00E-64 | Embryonic abundant protein USP92 (Precursor) |
| trEMBL | tr|G7ITL0|G7ITL0_MEDTR | 2.00E-152 | Embryonic abundant-like protein {ECO:0000313|EMBL:AES66786.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00045 | 322179 | 327971 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000045s00009983.1 | PF03181.10 | BURP | 108 | 250 | 2.30E-48 |
| Glyur000045s00009983.1 | PF03181.10 | BURP | 334 | 549 | 1.50E-73 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5624.236 |
| SRR1783600 | control | 5654.759 |
| SRR1783602 | moderate drought stress | 1984.481 |
| SRR1811619 | moderate drought stress | 1960.285 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1459.501 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1434.190 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 21.456 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 20.768 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 129.940 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 125.844 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 128.341 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 127.498 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5932.917 |
| SRR2868004 | Drought Stress (root) | 4727.059 |
| SRR2967015 | Control (root) | 4833.063 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 52.042 |
| SRR9715740 | Leaf | 17.685 |
| SRR9715741 | Leaf | 41.133 |
| SRR9715739 | Root | 4063.753 |
| SRR9715742 | Root | 2484.097 |
| SRR9715743 | Root | 2617.133 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.384 |
| SRR8749028 | MeJA induced 9h | 12.592 |
| SRR8749029 | MeJA induced 9h | 4.444 |
| SRR8749030 | Uninduced | 12.120 |
| SRR8749031 | Uninduced | 2.741 |
| SRR8749032 | Uninduced | 8.221 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7622.603 |
| SRR8400027 | Control - Root | 7944.640 |