Gene detail

Database	Orthologs	E value	Annotation
TAIR	AT5G63470.2	2.00E-25	nuclear factor Y, subunit C4
NR	XP_003540433.1	1.77E-69	PREDICTED: nuclear transcription factor Y subunit C-1-like [Glycine max]
Swissprot	tr\|Q9SMP0\|NFYC1_ARATH	4.00E-30	Nuclear transcription factor Y subunit C-1
trEMBL	tr\|I1LUT9\|I1LUT9_SOYBN	7.00E-70	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA12G34510.1}

Transcript Sequence

Protein Sequence

Scaffold	Start	End	Strand
Scaffold00045	306915	307304	+

Gene family	subfamily
Transcription Factors Family	NF-YC

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

biological_process
GO:0006355 regulation of transcription, DNA-templated

cellular_component

GO:0005622 intracellular

GO:0016602 CCAAT-binding factor complex

molecular_function

GO:0003700 transcription factor activity, sequence-specific DNA binding

GO:0043565 sequence-specific DNA binding

GO:0046982 protein heterodimerization activity

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000045s00009979.1	PF00808.18	CBFD_NFYB_HMF	23	87	4.50E-21

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.238
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.238

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.027
SRR8400027	Control - Root	0.328