Gene detail

Gene detail information of Glyur000045s00009953

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT5G54670.1	kinesin 3
NR	XP_004487619.1	PREDICTED: kinesin-3-like isoform X1 [Cicer arietinum]
Swissprot	tr\|P46875\|ATK3_ARATH	Kinesin-3
trEMBL	tr\|V7BUK9\|V7BUK9_PHAVU	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}

Sequence

Transcript Sequence

>Glyur000045s00009953.1
TGAGGATAATATTAATAAGGAAACCCTATTTTATTTTCACCTCTTTTCCTCTTTCTAAGTATCGATCTCTCTTTCTCTTCTTCCTTTTGAGTTCTGTGTGTGTGTGATTGTGTGGATCATCACCCATCTCTTCTTCCTAAAGCAACTGACTTTGATGTGTTGTTAGCTTTGAACACAATCCATGGCCCCACAGCACTAGTCTCACTTTCTCTCTCCTCACACACACTTCAGTGTTAGCNGTGAGCTTCAAAATGGTCACAATGAACTAGAACTGGCCTATAACATCACTCACATTCACACCTCCAAGCCCTTCAAAGTTCAAAGTGGAAATGAAACCTCACGCTTAAAAAAGTGACCTTTTTAATGCGGGTAATGAGCTCCTCATAGAGTGAAGCAGAAGGGAAAAGGGNAAAAAATGGTGGGAACTCCGATTAACGGAAGATTAAGGCCAGCTTTTGGAGATGTAAATGGTGGGCATGATCTAGGCCCAAGTAGTACTCCAGCAAGCAATGCTGGGTCTGATTATGGTATCATTGAGTTCACAAGAGAGGATGTGGAGGCCTTGCTAAATGAGAAATCCAAGAGGAAGGACAGATTTAATTATAAGGAAAGATGTGAAAATATGATGGATTATATAAAAAGGCTTAAGGTTTGCATCAGGTGGTTCCAAGACCTTGAGATGAGCTACTCACTAGAGCAAGAGAAGTTGAAGAATTCGTTGGAATTAGCCCAGCAGAAAAGCATGGAAATAGAGATGCTGCTCAAAATCAAGGAAGAAGAACTGAATTCAATTATTGTGGAAATGAGAAGGAATTGCACTAATTTGCAAGAGAAATTAATTAAGGAAGAATCGGATAAATCAGCGGCGATGGAATCTCTTGTTAAAGAAAGAGAGGCTAGGCTTGACTTTGAGAGGTCACATACTACGCTAACAGAGGATCTTGGGAGAGCTCAACGAGAGCTTCAAACTGCAAATCAGAAGATATCATCACTCAATGACATGTATAAGCAATTACAAGATTATATAACAAGCTTACAGCAGTACAATGGAAAGCTTCATTCCGAGCTTTCTTCAGTTGAAGATGAACTTAAGCTTGTAGAGAAGGAGAAAGCTACTGTAATGGAGAACCTTACCATGTTAAAAGGTCAACTTACTTTGTCNATGTCTTCTCAAGAAGAGGCTACAAAACAGAAGGATGCTTTGGCTAGTGAAGCTGCATCCCTTCGAGTAGAGTTGCAACAAGTGAGGGATGACCGGGATCGCCAATTATCTCAAGTGCAAACCTTAGGTACTGAATTAGTGAAGTTTAAAGATTCTACAGAAAAGTCCTGCTCTGAACTGAACAACTTGACCTTGAAAACAAATGAATTGGAGGCAAAATGTACTTTGCAAGATAACCAGATAAATGCATTACAAGAGAAGCTAACAATTGCAGAGAAGAAACTGGAGGTTTCTGATATATCTGCAATTGAGACAAGAACNGAATTTGAAGGGCAACAAAAACTTGTAAATGAGTTACAAAGACGATTGGCAGATGCAGAATATAAACTTATAGAAGGGGAGAAGCTGAGGAAAGAATTACATAATACCATCTTGGAACTGAAAGGGAACATCCGTGTGTTCTGTAGAGTGCGGCCTTTGTTACCTGATGAAGGTTGCGGCACAGAAGGCAAGATTATTTCTTATCCCACATCAATGGAAGCTTCTGGACGAGGCATTGAATTGACCCAAAATGGCCAAAAACATTCTTTTACCTTTGATAAAGTTTTTGCACCTGATGCATCCCAAGTTGAAGTTTTTACAGAAATTTCACAGCTTGTGCAAAGTGCTCTTGATGGTTATAAGGTTTGCATTTTTGCCTATGGTCAGACAGGGTCAGGGAAAACCTATACAATGATGGGCAGGCCTGGACATCCAGAAGAAAAGGGGTTGATACCTCGTTCGCTAGAACAAATATTTCAAACAAGACAGTCTCAGCAACCCCAAGGCTGGAAATATGAAATGCAGGTGTCAATGTTGGAGATATACAATGAAACAATTCGTGATCTGTTATCTACAAATAGGTCACCATCAGATGCGACACGTGTAGAAAATGGTACTCCTGGAAAGCAATACACAATCAAACATGATGCCAGTGGAAATACACATGTTTCTGATCTTACAGTAGTGGATGTTCAGAGTGTAAAAGAGGTCGCGTTTCTTTTAAATCAAGCGGCAAATAGCAGATCTGTGGGAAAAACTCAGATGAATGAACAATCTTCAAGGAGTCATTTTGTATTCACTCTCCGAATATATGGTGTAAATGAGAGCACTGACCAACAAGTACAAGGAATTCTAAACCTCATTGATCTTGCTGGGAGTGAGCGTCTTTCAAGGAGTGGCTCAACCGGGGACCGATTGAAAGAAACTCAAGCAATAAATAAAAGTCTGTCATCATTAAGTGATGTTATATTTGCTTTGGCCAAGAAGGAGGATCATGTCCCATTCAGGAACTCAAAGCTTACATACCTACTTCAGCCTTGTCTAGGAGGGGATTCAAAGACATTGATGTTTGTAAACATCTCTCCTGACCAAGCTTCAGCTGGTGAGTCACTCTGCTCGCTCCGGTTTGCTTCAAGAGTCAATGCTTGTGAAATTGGGACACCTCGCCGACACACCAACGGTCGCCCTACAGAGTCTCGCCTGAGCTATTTCTAATCATCATTTTACACTCATGAAATCATGAATATATTGTATAACCTATTTGTGGCAACCAAATGCCTGGCCTGTGTGGACTACTGCTACAATAACCAAAATAGCTTTAATTCTAACATCATACCATATAGTTTGTATAGTGAACAAGTTACCAAGTATGGCATTTAGTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00045	92468	98243	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0007018 microtubule-based movement

cellular_component
GO:0005871 kinesin complex

molecular_function

GO:0003777 microtubule motor activity

GO:0005524 ATP binding

GO:0008017 microtubule binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000045s00009953.1	PF00225.18	Kinesin	405	737	1.30E-109

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	16.222
SRR1783600	control	16.177
SRR1783602	moderate drought stress	20.390
SRR1811619	moderate drought stress	20.216

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	12.049
DRR006520	Root Summer glycyrrhizin high producing strain	12.060
DRR006521	Root Winter glycyrrhizin high producing strain	1.862
DRR006522	Root Winter glycyrrhizin high producing strain	1.731
DRR006523	Root Summer glycyrrhizin low producing strain	12.487
DRR006524	Root Summer glycyrrhizin low producing strain	12.604
DRR006525	Leaf Summer glycyrrhizin high producing strain	11.272
DRR006526	Leaf Summer glycyrrhizin high producing strain	11.258

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	28.658
SRR2868004	Drought Stress (root)	24.585
SRR2967015	Control (root)	23.744

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	17.033
SRR9715740	Leaf	15.190
SRR9715741	Leaf	13.740
SRR9715739	Root	0.973
SRR9715742	Root	11.882
SRR9715743	Root	9.669

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	25.418
SRR8749028	MeJA induced 9h	24.532
SRR8749029	MeJA induced 9h	13.041
SRR8749030	Uninduced	4.900
SRR8749031	Uninduced	1.533
SRR8749032	Uninduced	2.624

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	37.012
SRR8400027	Control - Root	36.909