Gene detail information of Glyur000045s00009949 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G20680.1 | 1.00E-85 | Domain of unknown function (DUF1995) |
| NR | XP_004487614.1 | 0 | PREDICTED: uncharacterized protein LOC101514187 [Cicer arietinum] |
| trEMBL | tr|G7IHE1|G7IHE1_MEDTR | 0 | Plant/F3H11-7 protein {ECO:0000313|EMBL:AES66865.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00045 | 73968 | 74996 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000045s00009949.1 | PF09353.5 | DUF1995 | 77 | 312 | 5.60E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.108 |
| SRR1783600 | control | 3.203 |
| SRR1783602 | moderate drought stress | 4.557 |
| SRR1811619 | moderate drought stress | 4.616 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.321 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.398 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.400 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.423 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.689 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.535 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 81.262 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 81.019 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.382 |
| SRR2868004 | Drought Stress (root) | 3.056 |
| SRR2967015 | Control (root) | 3.323 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 36.425 |
| SRR9715740 | Leaf | 55.224 |
| SRR9715741 | Leaf | 36.374 |
| SRR9715739 | Root | 1.514 |
| SRR9715742 | Root | 1.669 |
| SRR9715743 | Root | 2.098 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.548 |
| SRR8749028 | MeJA induced 9h | 0.417 |
| SRR8749029 | MeJA induced 9h | 0.178 |
| SRR8749030 | Uninduced | 0.184 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.363 |
| SRR8400027 | Control - Root | 4.127 |