Gene detail information of Glyur000045s00009942 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G04790.1 | 5.00E-62 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| NR | KHN27972.1 | 5.17E-169 | Pentatricopeptide repeat-containing protein, mitochondrial [Glycine soja] |
| Swissprot | tr|Q6NQ81|PP304_ARATH | 5.00E-67 | Pentatricopeptide repeat-containing protein At4g04790, mitochondrial (Precursor) |
| trEMBL | tr|K7LW88|K7LW88_SOYBN | 3.00E-169 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G34221.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00045 | 25345 | 31535 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.113 |
| SRR1783600 | control | 7.011 |
| SRR1783602 | moderate drought stress | 5.615 |
| SRR1811619 | moderate drought stress | 5.513 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.495 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.385 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.435 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.244 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 21.675 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 21.548 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.983 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.940 |
| SRR2868004 | Drought Stress (root) | 7.483 |
| SRR2967015 | Control (root) | 7.472 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.048 |
| SRR9715740 | Leaf | 7.262 |
| SRR9715741 | Leaf | 4.495 |
| SRR9715739 | Root | 1.308 |
| SRR9715742 | Root | 5.065 |
| SRR9715743 | Root | 5.047 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.827 |
| SRR8749028 | MeJA induced 9h | 8.855 |
| SRR8749029 | MeJA induced 9h | 5.882 |
| SRR8749030 | Uninduced | 5.651 |
| SRR8749031 | Uninduced | 1.094 |
| SRR8749032 | Uninduced | 1.024 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.195 |
| SRR8400027 | Control - Root | 9.314 |