Gene detail information of Glyur000044s00005193 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G61667.1 | 2.00E-36 | Protein of unknown function, DUF538 |
| NR | XP_004504966.1 | 1.91E-88 | PREDICTED: uncharacterized protein LOC101503226 [Cicer arietinum] |
| trEMBL | tr|V7CQL9|V7CQL9_PHAVU | 5.00E-78 | Uncharacterized protein {ECO:0000313|EMBL:ESW31216.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00044 | 379702 | 380541 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000044s00005193.1 | PF04398.7 | DUF538 | 37 | 145 | 1.40E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.312 |
| SRR1783600 | control | 6.351 |
| SRR1783602 | moderate drought stress | 6.119 |
| SRR1811619 | moderate drought stress | 6.161 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.176 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.815 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.474 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.457 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.314 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.049 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.261 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.392 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.089 |
| SRR2868004 | Drought Stress (root) | 1.742 |
| SRR2967015 | Control (root) | 1.298 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.374 |
| SRR9715740 | Leaf | 0.397 |
| SRR9715741 | Leaf | 0.553 |
| SRR9715739 | Root | 30.255 |
| SRR9715742 | Root | 7.213 |
| SRR9715743 | Root | 10.901 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 91.934 |
| SRR8749028 | MeJA induced 9h | 17.230 |
| SRR8749029 | MeJA induced 9h | 31.863 |
| SRR8749030 | Uninduced | 2.178 |
| SRR8749031 | Uninduced | 2.681 |
| SRR8749032 | Uninduced | 2.422 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.148 |
| SRR8400027 | Control - Root | 7.653 |