Gene detail information of Glyur000044s00005180 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G11380.1 | 5.00E-69 | PLAC8 family protein |
| NR | XP_003543095.1 | 4.57E-131 | PREDICTED: uncharacterized protein LOC100786186 [Glycine max] |
| Swissprot | tr|Q9LS43|PCR7_ARATH | 7.00E-12 | Protein PLANT CADMIUM RESISTANCE 7 |
| trEMBL | tr|I1M2D9|I1M2D9_SOYBN | 2.00E-131 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G32140.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00044 | 291331 | 294691 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000044s00005180.1 | PF04749.12 | PLAC8 | 72 | 194 | 3.80E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.158 |
| SRR1783600 | control | 6.048 |
| SRR1783602 | moderate drought stress | 11.999 |
| SRR1811619 | moderate drought stress | 12.087 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.022 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.775 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.369 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.248 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.777 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.890 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.390 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.468 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 21.922 |
| SRR2868004 | Drought Stress (root) | 42.521 |
| SRR2967015 | Control (root) | 32.816 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.556 |
| SRR9715740 | Leaf | 12.458 |
| SRR9715741 | Leaf | 10.898 |
| SRR9715739 | Root | 4.849 |
| SRR9715742 | Root | 5.471 |
| SRR9715743 | Root | 3.930 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.773 |
| SRR8749028 | MeJA induced 9h | 4.814 |
| SRR8749029 | MeJA induced 9h | 3.765 |
| SRR8749030 | Uninduced | 4.942 |
| SRR8749031 | Uninduced | 10.336 |
| SRR8749032 | Uninduced | 8.326 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.185 |
| SRR8400027 | Control - Root | 11.288 |