Gene detail

Gene detail information of Glyur000044s00005150

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT5G57580.1	Calmodulin-binding protein
NR	XP_004504984.1	PREDICTED: uncharacterized protein LOC101509425 [Cicer arietinum]
trEMBL	tr\|G7JRT0\|G7JRT0_MEDTR	Calmodulin-binding protein {ECO:0000313\|EMBL:AES90421.1}

Sequence

Transcript Sequence

>Glyur000044s00005150.1
AGAAAATTCTGAGATGTTTCTGCGAAATTTCTCAGATTCCGTACTTTTCAACCTTTCCCGCTTCCTTTTCCTTTTTCTCTTTCCGCCTTTTCCTTCTATTTCGTCAGAGCTTGTTTGGCTGCTGGGAAAACTAACAAAATTTAGCGCGAACAGCATANTTTTTTTTCCGGCTTTATTTATTTTGAGGTTCCGAGTCAAACTGAACTGTCGAAGCTTTTCTGTTACCGATAAAACCTACCAATTGTGCATTGTGCTGCTGCCGAATTNTTTTCTTTCACTTTCTCAGCAACCAAACAGGGATAACATTAACTCAGTGTGGAACTGGCATAATGCACGGGAGGTATGTGGATGTGGCGAGGGAGAAGCGAGGTTTGGATTCGGCTTCCGCGGAAGAAGNACAGCCTGATCGGAAACGACCTGCTCTGGCTAGTGTAATTGTTGAAGCCCTGAAGGTGGACAGTCTGCAGAAACTGTGCTCATCACTGGAGCCTGTTCTACGCAGAGTTGTTAGTGAAGAAGTGGAGCGTGCTTTGGCAAAACTAGGCCCCACCAAGCTTAATGGGAGGTCTTCTCCAAAGCGCTTAGCAGGCCCTAATGGCAAAAATTTACAATTGCACTTCAAGACCAGGCTATCCCTTCCCCTTTTTACTGGTGGGAAAGTGGAGGGTGAGCAAGGGGCAGCCATACACATTGTTTTGATTGATGCAAACACAGGCCGTGTTGTCACATCAGGCCCAGAGTCATGTGTCAAATTAGATGTCTTTGTGCTTGAGGGGGATTTCAATAATGAGGATGATGATAATTGGAGTGAAGAAGAGTTTGAGAGTCATATTGTGAAAGAGCGGGATGGGAAAAGGCCTCTTCTGACTGGTGATCTGCAAGTCACACTGAAGGAGGGCGTGGGAACANTGGGTGAGCTCTCNTTTACCGANAACTCTAGCTGGATAAGGAGTAGGAAGTTCAGATTGGGGCTGAAAGTTGCCTCAGGTTATTGTGAGGGAATGCATATTCGTGAAGCCAAATCAGAAGCTTTCACTGTTAAGGATCATCGTGGAGAATTATACAAGAAACACTACCCACCTGCCTTGCATGATGAGGTCTGGAGACTGGAGAAGATTGGTAANGATGGGTCCTTTCACAAAAGGCTAACTAAAGCAGGAATATATACTGTTGAAGACTTCCTAAGACTTGTGGTCAGAGACCCTCAGAGATTGCGGAATATTCTTGGGAGCGGCATGTCAAATAAGATGTGGGATGTCCTTGTTGAGCATGCAAAGACCTGTGTTCTCAGTGGAAAACTTTATGTATACTATCCTGATGATGCAAGAAACGTNGGTGTTGTTTTCAATAATATTTATGAATTGAGTGGCTTAATTGCCAACGACCAATATTACTCAGCTGATTCTCTCTCTGAGAGTCAAAAGGCAAACACATTGGTGAATAAGGCGTACGATAATTGGATGCATGTTATCGAGTACGACGGGAAGTCTCTGCTAAGTTACAATCAGGACAAGTATTTGGATACTGCTCATCCTCAGGCTCCAATGGGCTCCCATGAGTATTCAAACTCAATTCAGCAGATTTCCATCCCATGTTTGCCACTACCGGTACATACAGGCCAACCTTCATTGGATACAGGAGCGACAGGTGGAGGTTATCATGATGGTACAACTACCAGATTCTCCTTGCAATCACAGAATGCCAATCTTCATTCTTCTATTCAATTTGATGATAATGCTTTTCCACAACAAACCCAGTTGATGAGTGTTCCACACCAAGCTCAACTTCCACGAAATGAAAATGGGCCGACTCTTAGTCGACCACAATCAGCCACACATGGCTTCCAGACTGCCAGCATTTCTAATTCTACTTACAGAGGAGTTGAAGACTTCTTCCCAGAGGAAGAGATTCGTGTTAAAAGCCATGAGATGCTAGAAAATGAAGATATGCAGCATCTGCTACGTATTTTTAACACNGGAGGCCAAGCACATGCTTCCTTTAATGCCCACGAAGATGGGTACCCTAATTTATCTGCATACATGCCTGCAAACCCCACGANCTACAATTTTTATGATGAGCCAAACCGTTCCTCAGGCAAAGCTGTTGTGGGCTGGCTCAAGCTGAAGGCGGCTTTGAGATGGGGTATTTTTATTCGGAAGCAGGCTGCTGAGAGACGGGCTCAACTTGTTGAGATAGAAGACTCGTAAAGATCTTGGAGGCATTGCCATCTGTTATGATCTGAACAGTAATTGTTCTGAATATAGCATGGAAAGCTTCTTTCCGGACATTAAGGATTGCTGTCATGCTGAAATTTCATAGCATGACTNTGAGCAAGGACATGAAATCTGGATTGAATTATTTGGTGCAGGCTTAGCTTAAAGATTCCACTGTCTGCCAAAATTCATAAACAGTTGTGCAAGAGAAACCTGCCTGTGTAAGAATATGGCTCTGCAACAACTCTTTTGTAGCTGCTTTACATGTGATATTTTCACCCAGCATTCCTGTCTGCAAGTTGTAAAGGCTCGATTGTATGCCTGTTTTGAACTGAAGTTAATAGTTGCTTGAAGTTGGCAAGGTCTAAGTGTGAAATCTCGGGAAACTACGATCTTTCTACATTTGCTGGGTTGAATTGAATTATGTGTAGGTTAAGGTTAAATNATATTCAACCTAAGTGATGTGTCTTTTGTGCAATTTCAATGTGGCATAATAAGTTATAATCAATTCGAACTGCTAAAGTGCTTGGAGTACTGTTTACTGCCCGTGTGCTTTACGAATGTTTCAGCACCCCTACAAGTCTGCATACCTTGCCGTGGGATGTTAGTTTTATTATATGATTACT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00044	107738	114157	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000044s00005150.1	PF07887.6	Calmodulin_bind	92	390	5.20E-127

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	11.978
SRR1783600	control	12.040
SRR1783602	moderate drought stress	13.535
SRR1811619	moderate drought stress	13.485

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	22.497
DRR006520	Root Summer glycyrrhizin high producing strain	21.792
DRR006521	Root Winter glycyrrhizin high producing strain	4.541
DRR006522	Root Winter glycyrrhizin high producing strain	4.345
DRR006523	Root Summer glycyrrhizin low producing strain	20.554
DRR006524	Root Summer glycyrrhizin low producing strain	20.932
DRR006525	Leaf Summer glycyrrhizin high producing strain	15.348
DRR006526	Leaf Summer glycyrrhizin high producing strain	14.865

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	9.644
SRR2868004	Drought Stress (root)	13.056
SRR2967015	Control (root)	10.544

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	23.987
SRR9715740	Leaf	15.787
SRR9715741	Leaf	24.552
SRR9715739	Root	17.697
SRR9715742	Root	33.077
SRR9715743	Root	30.262

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	12.027
SRR8749028	MeJA induced 9h	16.542
SRR8749029	MeJA induced 9h	16.405
SRR8749030	Uninduced	28.617
SRR8749031	Uninduced	92.171
SRR8749032	Uninduced	41.695

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	16.927
SRR8400027	Control - Root	17.351