Gene detail

Gene detail information of Glyur000044s00005132.2

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G54390.1	9.00E-105	HAL2-like
NR	XP_003545856.1	0	PREDICTED: PAP-specific phosphatase HAL2-like [Glycine max]
COG	YP_007205281.1	2.00E-51	3'(2'),5'-bisphosphate nucleotidase, HAL2 family [Singulisphaera acidiphila DSM 18658]
Swissprot	tr\|Q38945\|DPNPH_ARATH	2.00E-126	PAP-specific phosphatase HAL2-like
trEMBL	tr\|K7MA10\|K7MA10_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA15G07450.2}

Sequence

Transcript Sequence

>Glyur000044s00005132.2
ATGATGCTGAGCATTGTTATTCTTGTAACTGATAATAATCTCATTCCCATTTGGCTCTTTCTCTCTTTACAAACGTCACAAAACCAATATCCCCACACTATTGGTCAAGTGGTAACCAGTAATAACCACCAATTNCTAACCACCTTTGGTGCAAACATCCCACGTATCTTGGGACATGGGAANAGACTCAGACATATAGAAGCAGCAAGTTCATGCTTCTTGTCCTCCCTCCTTCATAACTATAAGTCCCCCAACAACAACCTCTCAACCCACATTGGTTTTGTGTCTAAATTCGACCAAGTTTATTCTTCTTCTTCTTCTCCCTTAATGGAGAAGGAGGACCGACAACAAATGTTTGGTCTTGAGGAATATTCCAAAGAGTTGGATGTTGCTGTCAGAGCAGTGCAGATGGCATGCTCCCTCTGTCACAAAGTGCAAGGCACTTTGATTAGCAATGATCAGGTTCCATCCAAGCATGACAATTCTCTAGTCACAGTTGCNGGTTGGAGTGTCAAAGCAATTGTCAGCTGGATACTATCCAGGTGTTTAGGGGGTGAAAATATCTCTATTCTANCTGAAGAGGATGTTCAGACTCTCTCCAAGACTGAAGATTCTGAAGTGTTAGAAGCTGTGGTAAAAACTGTGAATGAATGTCTAGCTGAAGCACCTCGATTTGGAGTTGAGGAACCAAAAACAGCTCTTGAAACTTCAGAGGTTCTTGAAATCATTAGCCACTGCAGCTCAATTGGGGGTCCTTCTGGAAGATTTTGGGCACTTGGTCCTCTTGTTGGCACACTGGGGTTTGTACAAGGAGATCAATATGCTGTAGCTCTATCACTCATAGAGGATGGAGAAGTGGTGGTTGGAGTTCTTGGTTGTCCTAACTACCCAATGAGAAAGGACTGGCTAAGTTATCAACACCACTATCATAGGATCATATCTAAACTGACACCTCCAACCTCTGAAACTTGGNATAAAGGTTGTGTAATTTATGCCAAAAGGGGTAGTGGCAAGGCTTGGATCCAACCACTGCTCCATGTCAGTAAGGAGTTTGTGTGGCCAAACCATGCAAAACAAGCTTCTGTCTCTTCTATTGACANCCCAGCATTGGCCACTTTCTGTGAATCAGTTGAGAAGGCTAATTCAAGCCACTCTTTTACTGAAGGACTGGCTCATAGTGTTGGTCTCAGTAATATGCCATTAAGAGTTTACAGCATGGTGAAATATGCGGCGATAGCTTGTGGGGATGCTGAGGTTTTCATGAAGTTTGCAAGGGCTGGTTACAAGGAGAAAATATGGGATCATGCTGCTGGTGTCATAATAATACAGGAGGCAGGAGGCATGGTAACAGATGTTAGGGGGCTTCCCTTGGATTTTTCTAAAGGCTCATATTTAGAAGGGGTTGATCGTGGCATAGTTGCTTGTGCTGGAGCCACATTGCATGAAAAGNTCATCGATGCTATTGATGCTAGCTGGGCCTCTTCTTGCCTTTGACACCGTTTTCAATAATCTACANGTGTGTATTTATAAGTACATATATTGTGATCATGTTAATAACATTTTATCTTTTCTTTTCTGTTTTATATAGTATTATAGAAATCCCCCTGCTTAAACTCCAGTTATTGTTGTTGATGTATTTGTACCAGCTTGCTAGCTTGAAATTACCA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00044	23388	26443	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K01082	cysQ, MET22, BPNT1	EC:3.1.3.7	Sulfur metabolism	map00920
			Sulfur metabolism	map00920

Gene Ontology

biological_process

GO:0006790 sulfur compound metabolic process

GO:0046854 phosphatidylinositol phosphorylation

molecular_function
GO:0008441 3'(2'),5'-bisphosphate nucleotidase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000044s00005132.2	PF00459.20	Inositol_P	162	490	8.70E-40

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	42.968
SRR1783600	control	43.581
SRR1783602	moderate drought stress	34.378
SRR1811619	moderate drought stress	34.395

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	80.552
DRR006520	Root Summer glycyrrhizin high producing strain	78.978
DRR006521	Root Winter glycyrrhizin high producing strain	5.258
DRR006522	Root Winter glycyrrhizin high producing strain	5.099
DRR006523	Root Summer glycyrrhizin low producing strain	127.375
DRR006524	Root Summer glycyrrhizin low producing strain	125.670
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.158
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.127

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	11.200
SRR2868004	Drought Stress (root)	39.991
SRR2967015	Control (root)	17.595

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.839
SRR9715740	Leaf	9.455
SRR9715741	Leaf	6.172
SRR9715739	Root	75.143
SRR9715742	Root	224.108
SRR9715743	Root	186.388

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.146
SRR8749028	MeJA induced 9h	1.855
SRR8749029	MeJA induced 9h	0.213
SRR8749030	Uninduced	0.659
SRR8749031	Uninduced	0.121
SRR8749032	Uninduced	0.468

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	313.309
SRR8400027	Control - Root	434.944