Gene detail information of Glyur000043s00003850


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G15000.19.00E-41Ribosomal L27e protein family
NRXP_004485468.18.60E-76PREDICTED: 60S ribosomal protein L27-like [Cicer arietinum]
Swissprottr|Q05462|RL27_PEA8.00E-7660S ribosomal protein L27
trEMBLtr|C6TMU7|C6TMU7_SOYBN8.00E-7660S ribosomal protein L27 {ECO:0000256|RuleBase:RU000575}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold00043464858465959-


Gene family

Gene familysubfamily
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KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
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Gene Ontology

biological_process

GO:0006412  translation


cellular_component

GO:0005622  intracellular

GO:0005840  ribosome


molecular_function

GO:0003735  structural constituent of ribosome

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000043s00003850.1PF00467.24KOW9320.00018
Glyur000043s00003850.1PF01777.13Ribosomal_L27e521241.10E-25


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control159.171
SRR1783600control155.554
SRR1783602moderate drought stress168.459
SRR1811619moderate drought stress166.218

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain825.979
DRR006520Root Summer glycyrrhizin high producing strain807.758
DRR006521Root Winter glycyrrhizin high producing strain804.834
DRR006522Root Winter glycyrrhizin high producing strain783.961
DRR006523Root Summer glycyrrhizin low producing strain728.897
DRR006524Root Summer glycyrrhizin low producing strain731.203
DRR006525Leaf Summer glycyrrhizin high producing strain152.352
DRR006526Leaf Summer glycyrrhizin high producing strain153.495

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)1168.718
SRR2868004Drought Stress (root)648.316
SRR2967015Control (root)625.283

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf421.746
SRR9715740Leaf345.346
SRR9715741Leaf341.398
SRR9715739Root1321.600
SRR9715742Root875.381
SRR9715743Root941.246

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h497.954
SRR8749028MeJA induced 9h218.185
SRR8749029MeJA induced 9h281.557
SRR8749030Uninduced72.952
SRR8749031Uninduced27.495
SRR8749032Uninduced104.942

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root969.247
SRR8400027Control - Root786.124

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved