Gene detail information of Glyur000043s00003832 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G16000.1 | 1.00E-112 | MAR binding filament-like protein 1 |
| NR | XP_006592313.1 | 0 | PREDICTED: MAR-binding filament-like protein 1-like isoform X2 [Glycine max] |
| Swissprot | tr|Q9M7J4|MFP1_TOBAC | 3.00E-162 | MAR-binding filament-like protein 1-1 |
| trEMBL | tr|I1LRE3|I1LRE3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G09230.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00043 | 380522 | 383991 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.453 |
| SRR1783600 | control | 2.440 |
| SRR1783602 | moderate drought stress | 3.077 |
| SRR1811619 | moderate drought stress | 3.202 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.132 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.924 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.885 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.951 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.998 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.070 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.109 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.632 |
| SRR2868004 | Drought Stress (root) | 9.748 |
| SRR2967015 | Control (root) | 9.414 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.214 |
| SRR9715740 | Leaf | 4.856 |
| SRR9715741 | Leaf | 6.501 |
| SRR9715739 | Root | 0.543 |
| SRR9715742 | Root | 2.270 |
| SRR9715743 | Root | 1.314 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.176 |
| SRR8749028 | MeJA induced 9h | 8.230 |
| SRR8749029 | MeJA induced 9h | 6.085 |
| SRR8749030 | Uninduced | 8.583 |
| SRR8749031 | Uninduced | 3.616 |
| SRR8749032 | Uninduced | 2.172 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.217 |
| SRR8400027 | Control - Root | 6.889 |