Gene detail

Gene detail information of Glyur000043s00003831

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G25690.2	6.00E-23	Protein of unknown function (DUF581)
NR	XP_006595139.1	0	PREDICTED: uncharacterized protein LOC100793953 isoform X1 [Glycine max]
trEMBL	tr\|K7M3V3\|K7M3V3_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA13G43661.1}

Sequence

Transcript Sequence

>Glyur000043s00003831.1
GTAGTACATCGCAGTGGTTCACTGTTTCTCTGACTTTGATGCATGCAAGAGGAAGATGGTGAAAAAAATCTTCTGATTAAACGAAGGAAGAAAAAAACAATATGTAAAGAGAGAGTGTATGTAGTGTTGTAGGTGAGAACAAGTTGTGGTCTTTGCTGCTGATGTTCATCACTCCAAGGATTCTGCATTTGGGTTTCTCTCAGATTGCAAAAAATTTTCTGGATTTGATGCAGCAAGGTTTCATCCTTTTAAGAGGAATGGGGTACTTACTAGCATAATGCTGAAGAAGAAGGAACATACTTGGAAGAATTTTGATCTCATGGCTGATTCTTCATCCAGTTTCTCTTTACCTTCTGATNCATCAAGTCTAAGACAAATAAGCTCCTCAATTTTTCACCCCTCTGGTTCTAGGGTGGGGGTTGGTGCAAAAGGCTTACCGGATTNCGAATCCGTTTGGAGCCCTACATCTCCTCTTGATTGCAGACTCTTCTCAAATCTTAGCAACACTTTTAGTGTCAGGTCTTCTAGACCTTCATTNCAAACTGGGCATAAGAAACAGTTAGATTGCAGTAGTAAAGTAGGTCTTGGCATCATAAGTTCACTTGCTAATGAAACCAAACTTGATAATAATGAGACCCTTGGTAAGCTTCAGAGGAAAAATATAATTTTTGGATCACAGGTGAAGAATGGCATANTTAAATTCTCAAAGAACAACCATGAATCCCTTGCACCTTATTTGAAATCTAACTCCTTGCCCAAAAACTATGTAATTTCACTTNCTTCTGAAACCAAAAGTCCCAAATCAGAAGTGGAAAACTTTGGTGATGTCAATTNGGAATCAAAGGGTATCAGAAGTACTGTGGCTTCTTTGCCTGATTCCTCTAGGTCGTCTTCTTCATTAATCAACTCAACCCAAAACTCTATTTTGGGAACCAATGATTTATTTNTAGAAAATGCATCTACAGCATTGAGTTTGCCTCCAGTGACAAGCAGAAGTTCACAAGTNGATAATTCTTTAAAAACTAAATCAAGTTCACTCCCAATATCCATTGATTTCAGTAATGGATACATAGGCTCACTCTCTGCAAGAGAGATAGAGCTTTCTGAGGATTATACTTGTATAATTTCTCATGGTCCAAACCCGAAGCGAACACATATTTTTGGTGACCGCATTTTGGAATGTCACAACAATGACTTTACNGAGTTCAGCAAGAAGGAAGAACCATCTTTCAGATCTTCTCAAGTTCCCACATTTTCAGAAGAATCAGCACCTCANCCTTTTGACAATGTTATGAGCTTTTGTTACACATGTAATAAGAAATTAGAAGAGGGGGAAGACATTTACACATACAGCGGTGAGAAAGCATTTTGCAGTTCTAACTGTCGATCCGAGGAAATTTTGGCAGAAGAGGAAACGGTGAAAACTTGCACTAACTCAGCAGAGAGCTCTCCTNACTCAAGTTACCATGATCTCTTCCTCATGGGTCTGCTTGTGTCCAAATAACATGCCTTTGAGTTTATTTACTTTATTGGGAGGCAGGATTCATCAAGTTATGAAATTGTTGAGAAGGTAAAAGATGTGAATAATTTTATTTGCAAACAATTGCCTATGTGAATTTGTTTGTGCTTTGGGGTGATTGCTATGCAAATTATGCATTGTGCCTAGTTGTCAAGAACCAAATTTCATGGTTCAGNGAGTTATTATATTATAGCTAGGAAAGGCAGTGTTTTCTCCCTCTTGAATCCTGATAACTCAAACAGATATGTGCATTGTAATGTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00043	376375	378957	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000043s00003831.1	PF04570.9	DUF581	329	379	1.50E-18

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	12.383
SRR1783600	control	12.580
SRR1783602	moderate drought stress	6.110
SRR1811619	moderate drought stress	6.145

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	9.563
DRR006520	Root Summer glycyrrhizin high producing strain	9.244
DRR006521	Root Winter glycyrrhizin high producing strain	0.938
DRR006522	Root Winter glycyrrhizin high producing strain	0.963
DRR006523	Root Summer glycyrrhizin low producing strain	6.404
DRR006524	Root Summer glycyrrhizin low producing strain	6.379
DRR006525	Leaf Summer glycyrrhizin high producing strain	7.280
DRR006526	Leaf Summer glycyrrhizin high producing strain	7.185

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	7.369
SRR2868004	Drought Stress (root)	6.764
SRR2967015	Control (root)	4.222

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.496
SRR9715740	Leaf	2.117
SRR9715741	Leaf	2.809
SRR9715739	Root	1.168
SRR9715742	Root	5.053
SRR9715743	Root	3.719

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	5.120
SRR8749028	MeJA induced 9h	3.007
SRR8749029	MeJA induced 9h	2.035
SRR8749030	Uninduced	0.512
SRR8749031	Uninduced	0.123
SRR8749032	Uninduced	0.109

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	19.105
SRR8400027	Control - Root	16.676