Gene detail

Gene detail information of Glyur000043s00003829.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G24490.1	3.00E-54	Alcohol dehydrogenase transcription factor Myb/SANT-like family protein
NR	KHM98767.1	5.78E-157	hypothetical protein glysoja_030820 [Glycine soja]
Swissprot	tr\|Q9LJG8\|ASIL2_ARATH	2.00E-23	Trihelix transcription factor ASIL2 {ECO:0000305}
trEMBL	tr\|I1MCN1\|I1MCN1_SOYBN	4.00E-157	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA15G01730.1}

Sequence

Transcript Sequence

>Glyur000043s00003829.1
ATGGATGATCATGACATTGAGGATGATGCAAGGCATCTCCATAATCCATATGGTGTTAGACTTGGTCACAACCACCAAGGTTATGGTTATCTGAGTCGTCAGAAACCTCCTGTGAGGAATTCCCCATATTCTCATCCAGTTGCAAATGAATCTGCACAAGACAATGATGATGGTGATGAAGAAGGATTGGGAGGGGAAGATGATGGTGATGATGATGTTGATCAAAATGATAGTGTTCAACTTTCCCAGAAGCATTCTGATGACAATGATGATGAAGAAGATGACACTGATGATGGGGATGGTGATGAAAATGTTAATGATGATGACAACAACAATGATGATAATGATGATGGTGGTGATGGNNATGACAATAAGCAGAACAGTTATGCCGTTAAGACTGAAGATGACTTAGAGTGGCACCCAAAAAAGCAAAAGCTGAAGAGTTTGGTTTCAGCCTATGAATTTGCACCTCGGGNACCAGCAGCTTCACCACCAGCTGCAGCTCCCAAACCATCTTTTTGGGGTAGGAATTCCCTTACTGACTGGACTGAGCACGAGACATTTGTTCTTCTTGATGCGTGGGGTGATCGGTTTCTTCAACGCGGAAGGAAGAGTCTTCGATCTGAGGAATGGCAAGAAGTTGCAGAGAAGGTATCACAAGTTTCCAAAATTGAAAGGTCAGATACTCAGTGTAGAAATCGTCTAGATACACTGAAGAAAAAATACAAAAAGGAGAAGATTAAATTTACAGAAATGGGTAGTAGTGGTGGAGCTANCAAATGGGTTTACTTTAAAAGGATGGACAAGCTAATGTCTTCTCCACCACAACAAGCAAGTCTATCTTGTGGTTTGGACTCAGGAGAGTACGTTTTTATGAACCCTGGAGTTTATTTGAACAGTGCAAATGGGTTGGATGAAATGAGGGATAGTCCTGGGAATACAGAATGTATTGGTGAAGAAGGTTCAGATGGGCCTCAAGCAAAGAAAAGAAGGAAAGGAAGGGGCAGTGATGAGGCTTCTTCCTTCAAATTACTTGCTGACTCCATTCAGAAATTCAGTAAGATATATGAGAAGACTGAAAATAGTAAAAGGNAGCAGATGATGGAATTGGAAAAGATGAGGATGGATTTCCTCAATGAATTGGAAACACAAAAGAGACAGATTTTAGGAAGGTTGCCGAGTGAGATCTCGAAACTAGAGCAGAGAGATGATGAGAATGATGATGATTCTGCATAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00043	367534	368769	-

Gene family

Gene family	subfamily
Transcription Factors Family	Trihelix

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0003677 DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000043s00003829.1	PF13837.1	Myb_DNA-bind_4	181	270	4.30E-21

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.743
SRR1783600	control	4.801
SRR1783602	moderate drought stress	5.426
SRR1811619	moderate drought stress	5.432

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	8.059
DRR006520	Root Summer glycyrrhizin high producing strain	8.295
DRR006521	Root Winter glycyrrhizin high producing strain	7.902
DRR006522	Root Winter glycyrrhizin high producing strain	6.699
DRR006523	Root Summer glycyrrhizin low producing strain	13.574
DRR006524	Root Summer glycyrrhizin low producing strain	13.013
DRR006525	Leaf Summer glycyrrhizin high producing strain	6.210
DRR006526	Leaf Summer glycyrrhizin high producing strain	5.372

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	10.291
SRR2868004	Drought Stress (root)	13.911
SRR2967015	Control (root)	13.631

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	4.472
SRR9715740	Leaf	8.814
SRR9715741	Leaf	5.552
SRR9715739	Root	1.144
SRR9715742	Root	3.439
SRR9715743	Root	3.121

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	5.395
SRR8749028	MeJA induced 9h	8.432
SRR8749029	MeJA induced 9h	4.325
SRR8749030	Uninduced	10.437
SRR8749031	Uninduced	3.179
SRR8749032	Uninduced	3.297

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	8.445
SRR8400027	Control - Root	9.524