Gene detail information of Glyur000043s00003825.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G79960.1 | 2.00E-32 | ovate family protein 14 |
| NR | XP_003597774.1 | 2.14E-117 | hypothetical protein MTR_2g102140 [Medicago truncatula] |
| Swissprot | tr|Q9S7T5|OFP14_ARATH | 2.00E-43 | Transcription repressor OFP14 |
| trEMBL | tr|G7II51|G7II51_MEDTR | 8.00E-118 | Ovate transcriptional repressor {ECO:0000313|EMBL:AES68025.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00043 | 336187 | 337179 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | OFP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000043s00003825.1 | PF04844.8 | Ovate | 222 | 289 | 9.60E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.174 |
| SRR1783600 | control | 1.155 |
| SRR1783602 | moderate drought stress | 1.986 |
| SRR1811619 | moderate drought stress | 1.941 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.925 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.686 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.515 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.216 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.335 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.317 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 60.285 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 59.438 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.543 |
| SRR2868004 | Drought Stress (root) | 2.414 |
| SRR2967015 | Control (root) | 1.995 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 49.204 |
| SRR9715740 | Leaf | 58.339 |
| SRR9715741 | Leaf | 51.033 |
| SRR9715739 | Root | 1.161 |
| SRR9715742 | Root | 2.728 |
| SRR9715743 | Root | 2.454 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.585 |
| SRR8749028 | MeJA induced 9h | 0.853 |
| SRR8749029 | MeJA induced 9h | 0.477 |
| SRR8749030 | Uninduced | 0.152 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.057 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.967 |
| SRR8400027 | Control - Root | 3.894 |