Gene detail

Gene detail information of Glyur000043s00003822

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G19640.1	2.00E-54	Ras-related small GTP-binding family protein
NR	KHM98762.1	1.50E-107	Ras-related protein RABF2b [Glycine soja]
COG	YP_007670739.1	1.00E-14	Ras family protein [Polaribacter sp. MED152]
Swissprot	tr\|P31583\|RHN1_NICPL	8.00E-68	Ras-related protein RHN1
trEMBL	tr\|I1MCN5\|I1MCN5_SOYBN	6.00E-108	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA15G01780.1}

Sequence

Transcript Sequence

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00043	324195	326873	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0007165 signal transduction

GO:0007264 small GTPase mediated signal transduction

GO:0015031 protein transport

cellular_component

GO:0005622 intracellular

GO:0016020 membrane

molecular_function
GO:0005525 GTP binding

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Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000043s00003822.1	PF00071.17	Ras	12	135	2.40E-36

Expression pattern

SRA Experiment	Description	TPM
SRR1783599	control	0.067
SRR1783600	control	0.064
SRR1783602	moderate drought stress	0.185
SRR1811619	moderate drought stress	0.140

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.068
DRR006521	Root Winter glycyrrhizin high producing strain	0.722
DRR006522	Root Winter glycyrrhizin high producing strain	1.335
DRR006523	Root Summer glycyrrhizin low producing strain	0.202
DRR006524	Root Summer glycyrrhizin low producing strain	0.084
DRR006525	Leaf Summer glycyrrhizin high producing strain	6.983
DRR006526	Leaf Summer glycyrrhizin high producing strain	6.902

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.741
SRR2868004	Drought Stress (root)	1.431
SRR2967015	Control (root)	1.201

SRA Experiment	Description	TPM
SRR9715738	Leaf	8.079
SRR9715740	Leaf	7.537
SRR9715741	Leaf	8.959
SRR9715739	Root	0.000
SRR9715742	Root	0.000
SRR9715743	Root	0.000

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.025
SRR8749032	Uninduced	0.000

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.180
SRR8400027	Control - Root	0.143