Gene detail

Gene detail information of Glyur000043s00003816

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT3G16060.1	ATP binding microtubule motor family protein
NR	XP_004486737.1	PREDICTED: kinesin-related protein 6-like [Cicer arietinum]
Swissprot	tr\|Q940B8\|KIN13_ARATH	Kinesin-13A
trEMBL	tr\|I1MCP5\|I1MCP5_SOYBN	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}

Sequence

Transcript Sequence

>Glyur000043s00003816.1
GTGCCGGCCAGAGAGCCTCTCNTTCAAAAAAATTTCAAAGGAAGCCAACCAGCCTTCGTTTCATTTCATTGCAACACTTGACTGTTCTCGTTGTTGCTGTCATATCGTATCGTATCTATTCCTTCCTATATCTTCGGTTTCACTCCATTGCTCCTCATCTTCACTCCCCTTCCATTTAGGGGAACGTTCCNATCTGATCGCAGGCGAAGATGAACGGTGCAGGGAGACAGGGGCTGAGATCTGGTGCCACCGGCGTCCACCACCAGCGCCAGTACTCCGACAACTTCCTCGACGGCTCCTCCACCGGCAACCGGTGGCTCCAATCTGCTGGCCTCCAACACCTCCAACAGGACTATAACTTGTACGGCGGCGGAGCGCAGGGAGGAAGAATGTACAGGAATGCTCAGAGGAGCTTCAATGGAGGAGGAACTGACTATTACATGGAACCCTCCACGCCTCCNGGCAGTTACCGTGTTTCGACTCAGAAGAAGAACGGCGAAGATTCGCCCGGTGATTTCAGCCCCGGCTTGTTGGATCTGCATTCATTCGACACCGAGCTTCTCCCTGAGATGCCAACCTCCAATGCATATGATGCCAACTCCCTGTATCAACCTATCNGGGGTAGAAGCTTTGATGACAATGAACCTTACATGTTGAGCAAACAGACTGCCAAAGCTCGTGCTCCTGAAAACGTGTTGAAAAGTTTACCNGCAGAAAAAGAGAAATCTAGTTCTGTAGCAAAGATTAAAGTTGTGGTTCGTAAGAGACCATTGAATAAGAAGGAACTAGCAAAGAATGAGGAAGACATTATCGATACATATTCCAATGCATTAACAGTGCANGAAACTAAACTGAAGGTTGACCTGACTCAGTACGTAGAGAAGCATGAATTTGTTTTCGATGCAGTCTTGAATGAAGAGGTTACAAATGATGAGGTGTATCGTGAAACAGTGGAACCCATAGTTCCAATAATCTTTGAACGCACTAAGGCAACTTGCTTTGCATATGGGCAAACAGGAAGTGGAAAAACTTATACAATGAAGCCACTGCCACTTAAAGCATCAAGGGACATCCTAAGATTGATGCATCATACTTATAGGAACCAGGGATTTCAGTTGTTCGTGAGTTTCTTTGAAATATATGGCGGGAAGCTTTTCGATCTCCTTAATGATCGAAAAAAACTTTGCATGAGGGAGGATGGTAAGCAGCAAGTTTGCATTGTGGGTTTGCAAGAGTACCGAGTATCGGATGTGGAGAACATCAAAGACCTGATTGAGAAAGGAAGTGCCACAAGAAGTACAGGCACCACAGGTGCAAATGAGGAATCTTCACGGTCACATGCAATACTCCAGCTTGCTATCAAGAGGTCAGTTGATGGTAGTGAATCCAAACCTCCCCGACTTGTTGGCAAGCTCTCCTTCATAGATCTTGCTGGAAGTGAACGTGGAGCTGATACCACCGATAATGACAAACAGACAAGAATAGAAGGTGCTGAAATCAACAAGAGCTTACTCGCCTTAAAGGAATGCATAAGAGCTCTTGATAATGACCAAGGACACATCCCTTTCAGGGGCAGTAAACTGACTGAAGTTTTGAGGGATTCATTTGTTGGCAATTCTCGCACTGTTATGATATCATGCATATCACCAAGCTCTGGTTCATGCGAGCATACCCTGAATACATTAAGATATGCTGACAGGGTAAAAAGCCTATCGAAAGGGAACAATTCGAAGAAGGATGTTTTNTCTTCGAATTTCAACCTTAAAGAATCAACTATGGTTCCCTTATCTTCTGTTACTGCACCAGCCTATGAGGATCAAACAGCTGATGCATGGCATGATGAAAATGAAGTGGATGACTTTAGTCCCCCTGAAGAGTACTACGAGCAGGTGAAACCGTCGTTGAAGAAAAATGGAAAGATGGAGTCATATGCAACAACTGATGACAAATTAAAGAAACCCGGTGGTCAGATCAAATGGAAGGACCTCCCAAAAGTTGAACCTAAAACCACTAACCCAGAGGATGATTTAAATGNCCTCTTACAGGAAGAAGAGGACCTTGTAAATGCTCACCGGACACAAGTAGAGGAGACCATGAATATTGTTAGAGAGGAGATGAACCTCTTGGTTGAAGCAGATCAACCAGGGAATCAGCTGGACGATTATATAACAAGACTAAATGCCATTCTTTCTCAGAAGGCTGCTGGCATTCTGCAGTTGCAAACCCGCTTAGCTCATTTTCAGAAACGTTTGAAGGAGCATAACGTTTTGGTCTCATCTACTGGTTACTAATATCATTTAAAACAGATTCCTAGTGAGAAACTTTTTTTTAGGTTGTCGGAATCATGCATTTCTGTGATTCAGTGGGAAATTATGATATTCGGGATATGACATNGCACTATTTCTAGTTGATTCATCATAATTTTGTACCTTGGCAACTCTCCTCGCGAAACTGGAGTTTGGAATTTTCATATATTTTTTTCTCTTTACCTGCTAAGAATGTAGACATGTATTGGTTTTACGTGCTGCGGTCGAGGCAATGTATCGATGTATAAAGCTCTCAATTTGATGTTGGATTGATCAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00043	279848	285439	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0007018 microtubule-based movement

cellular_component
GO:0005871 kinesin complex

molecular_function

GO:0003777 microtubule motor activity

GO:0005524 ATP binding

GO:0008017 microtubule binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000043s00003816.1	PF00225.18	Kinesin	184	500	1.20E-94

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	52.533
SRR1783600	control	52.929
SRR1783602	moderate drought stress	27.350
SRR1811619	moderate drought stress	27.000

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	36.945
DRR006520	Root Summer glycyrrhizin high producing strain	36.635
DRR006521	Root Winter glycyrrhizin high producing strain	3.572
DRR006522	Root Winter glycyrrhizin high producing strain	3.569
DRR006523	Root Summer glycyrrhizin low producing strain	25.766
DRR006524	Root Summer glycyrrhizin low producing strain	25.796
DRR006525	Leaf Summer glycyrrhizin high producing strain	24.014
DRR006526	Leaf Summer glycyrrhizin high producing strain	23.838

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	43.097
SRR2868004	Drought Stress (root)	23.838
SRR2967015	Control (root)	26.411

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	17.355
SRR9715740	Leaf	15.497
SRR9715741	Leaf	20.985
SRR9715739	Root	3.788
SRR9715742	Root	14.265
SRR9715743	Root	11.718

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	21.062
SRR8749028	MeJA induced 9h	22.365
SRR8749029	MeJA induced 9h	10.632
SRR8749030	Uninduced	0.969
SRR8749031	Uninduced	0.412
SRR8749032	Uninduced	0.803

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	49.634
SRR8400027	Control - Root	47.902