Gene detail information of Glyur000043s00003803


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G79850.16.00E-27ribosomal protein S17
NRXP_003597741.17.06E-6630S ribosomal protein S17 [Medicago truncatula]
COGYP_004676351.17.00E-1930S ribosomal protein S17 [Hyphomicrobium sp. MC1]
Swissprottr|P17092|RR17_PEA9.00E-5130S ribosomal protein S17, chloroplastic (Precursor; Fragment)
trEMBLtr|B7FMT1|B7FMT1_MEDTR3.00E-66Uncharacterized protein {ECO:0000313|EMBL:AFK34005.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold00043236101236565-


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0006412  translation


cellular_component

GO:0005622  intracellular

GO:0005840  ribosome


molecular_function

GO:0003735  structural constituent of ribosome

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000043s00003803.1PF00366.15Ribosomal_S17541221.90E-27


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control117.233
SRR1783600control120.191
SRR1783602moderate drought stress239.831
SRR1811619moderate drought stress240.314

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain112.750
DRR006520Root Summer glycyrrhizin high producing strain111.482
DRR006521Root Winter glycyrrhizin high producing strain296.445
DRR006522Root Winter glycyrrhizin high producing strain289.867
DRR006523Root Summer glycyrrhizin low producing strain194.713
DRR006524Root Summer glycyrrhizin low producing strain195.439
DRR006525Leaf Summer glycyrrhizin high producing strain845.982
DRR006526Leaf Summer glycyrrhizin high producing strain835.377

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)68.905
SRR2868004Drought Stress (root)83.282
SRR2967015Control (root)80.181

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf427.387
SRR9715740Leaf564.399
SRR9715741Leaf313.115
SRR9715739Root182.422
SRR9715742Root65.507
SRR9715743Root69.819

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h166.251
SRR8749028MeJA induced 9h120.147
SRR8749029MeJA induced 9h110.850
SRR8749030Uninduced83.487
SRR8749031Uninduced34.290
SRR8749032Uninduced106.414

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root79.494
SRR8400027Control - Root76.009

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved