Gene detail information of Glyur000043s00003797 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G52200.1 | 3.00E-55 | PLAC8 family protein |
| NR | NP_001241518.1 | 6.78E-106 | uncharacterized protein LOC100788713 [Glycine max] |
| Swissprot | tr|Q9M815|PCR8_ARATH | 9.00E-69 | Protein PLANT CADMIUM RESISTANCE 8 |
| trEMBL | tr|C6TFF7|C6TFF7_SOYBN | 3.00E-106 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G01990.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00043 | 202725 | 203983 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000043s00003797.1 | PF04749.12 | PLAC8 | 34 | 133 | 2.20E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.075 |
| SRR1783600 | control | 0.073 |
| SRR1783602 | moderate drought stress | 0.073 |
| SRR1811619 | moderate drought stress | 0.073 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.356 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.185 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 51.323 |
| SRR2868004 | Drought Stress (root) | 71.375 |
| SRR2967015 | Control (root) | 77.568 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.033 |
| SRR9715740 | Leaf | 6.352 |
| SRR9715741 | Leaf | 19.480 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.226 |
| SRR9715743 | Root | 0.589 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 25.573 |
| SRR8749028 | MeJA induced 9h | 53.226 |
| SRR8749029 | MeJA induced 9h | 50.960 |
| SRR8749030 | Uninduced | 75.795 |
| SRR8749031 | Uninduced | 81.711 |
| SRR8749032 | Uninduced | 81.593 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.163 |
| SRR8400027 | Control - Root | 7.803 |