Gene detail information of Glyur000043s00003795 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G52190.1 | 6.00E-173 | Major facilitator superfamily protein |
| NR | XP_003546946.1 | 0 | PREDICTED: probable peptide transporter At1g52190-like [Glycine max] |
| COG | YP_008149431.1 | 7.00E-22 | hypothetical protein SCE1572_14985 [Sorangium cellulosum So0157-2] |
| Swissprot | tr|Q9M817|PTR6_ARATH | 0 | Protein NRT1/ PTR FAMILY 1.2 |
| trEMBL | tr|I1MCR8|I1MCR8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G02000.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00043 | 196920 | 202349 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000043s00003795.1 | PF00854.16 | PTR2 | 100 | 489 | 3.10E-55 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.129 |
| SRR1783600 | control | 0.116 |
| SRR1783602 | moderate drought stress | 0.108 |
| SRR1811619 | moderate drought stress | 0.098 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.266 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.183 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.251 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.286 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.228 |
| SRR2868004 | Drought Stress (root) | 21.806 |
| SRR2967015 | Control (root) | 22.453 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.254 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.212 |
| SRR9715739 | Root | 0.202 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.115 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.229 |
| SRR8749028 | MeJA induced 9h | 1.194 |
| SRR8749029 | MeJA induced 9h | 0.360 |
| SRR8749030 | Uninduced | 0.374 |
| SRR8749031 | Uninduced | 0.406 |
| SRR8749032 | Uninduced | 1.799 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.990 |
| SRR8400027 | Control - Root | 0.574 |