Gene detail information of Glyur000043s00003792 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G29100.1 | 3.00E-62 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | XP_006583063.1 | 1.82E-163 | PREDICTED: transcription factor bHLH68-like isoform X3 [Glycine max] |
| Swissprot | tr|Q8S3D1|BH068_ARATH | 7.00E-76 | Transcription factor bHLH68 |
| trEMBL | tr|I1KGL9|I1KGL9_SOYBN | 7.00E-164 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G02120.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00043 | 176664 | 180453 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.187 |
| SRR1783600 | control | 13.166 |
| SRR1783602 | moderate drought stress | 8.007 |
| SRR1811619 | moderate drought stress | 7.997 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.863 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.548 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 38.171 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 36.156 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.283 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.144 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.154 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.224 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 73.311 |
| SRR2868004 | Drought Stress (root) | 82.968 |
| SRR2967015 | Control (root) | 68.651 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.492 |
| SRR9715740 | Leaf | 20.771 |
| SRR9715741 | Leaf | 23.800 |
| SRR9715739 | Root | 7.406 |
| SRR9715742 | Root | 27.209 |
| SRR9715743 | Root | 23.943 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.481 |
| SRR8749028 | MeJA induced 9h | 0.348 |
| SRR8749029 | MeJA induced 9h | 1.164 |
| SRR8749030 | Uninduced | 0.597 |
| SRR8749031 | Uninduced | 0.019 |
| SRR8749032 | Uninduced | 0.693 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 47.286 |
| SRR8400027 | Control - Root | 39.924 |