Gene detail information of Glyur000043s00003781 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G16250.1 | 1.00E-49 | NDH-dependent cyclic electron flow 1 |
| NR | XP_004486767.1 | 1.84E-91 | PREDICTED: uncharacterized protein LOC101490201 [Cicer arietinum] |
| COG | YP_007160732.1 | 1.00E-07 | ferredoxin [Cyanobacterium aponinum PCC 10605] |
| trEMBL | tr|I3SQH3|I3SQH3_LOTJA | 6.00E-90 | Uncharacterized protein {ECO:0000313|EMBL:AFK42515.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00043 | 119249 | 121302 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.115 |
| SRR1783600 | control | 0.113 |
| SRR1783602 | moderate drought stress | 0.040 |
| SRR1811619 | moderate drought stress | 0.040 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.116 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.113 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.115 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.115 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 134.458 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 132.218 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.762 |
| SRR2868004 | Drought Stress (root) | 1.391 |
| SRR2967015 | Control (root) | 1.846 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 47.622 |
| SRR9715740 | Leaf | 65.767 |
| SRR9715741 | Leaf | 28.972 |
| SRR9715739 | Root | 0.046 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.483 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.111 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.047 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.285 |
| SRR8400027 | Control - Root | 0.553 |